RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 MT-ND5P03915 603 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 TPM3P06753 285 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 PATE4P0C8F1 98 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 UBL4AP11441 157 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ATP6V1C1P21283 382 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 PAX7P23759 505 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 IVDP26440 423 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 CCNG1P51959 295 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 SUMO3P55854 103 aaPredicted RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 BTG1P62324 171 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 RBBP4Q09028 425 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 DCTN2Q13561 401 aaKnown RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 PDE7AQ13946 482 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 CEACAM16Q2WEN9 425 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ARHGAP11BQ3KRB8 267 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 SLC25A53Q5H9E4 307 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 SPANXN3Q5MJ09 141 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 SPATA46Q5T0L3 261 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ARMC3Q5W041 872 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 LHFPL2Q6ZUX7 228 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 RPS27LQ71UM5 84 aaKnown RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 VASH1Q7L8A9 365 aaPredicted RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 GALNT7Q86SF2 657 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ISCA2Q86U28 154 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 KDM8Q8N371 416 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ZNF563Q8TA94 476 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 STAG3L4Q8TBR4 150 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 SLC25A43Q8WUT9 341 aaPredicted RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 SELENOMQ8WWX9 145 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 BOD1Q96IK1 185 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ZNF317Q96PQ6 595 aaPredicted RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 NKX3-1Q99801 234 aaPredicted RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 BPIFA3Q9BQP9 254 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 NUDT16L1Q9BRJ7 211 aaKnown RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 MOV10Q9HCE1 1003 aaKnown RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 NUDT4Q9NZJ9 180 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 DNAJB11Q9UBS4 358 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 GUCA1BQ9UMX6 200 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 MTO1Q9Y2Z2 717 aaKnown RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 CAPN6Q9Y6Q1 641 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 KMT2AQ03164 3969 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 KIR2DS1A0A191URI9 304 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 A0A1W2PRD5 423 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 A0A1W2PRF3 423 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 A0A1W2PRM7 423 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 PLSCR5A0PG75 271 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 ZC3H12DA2A288 527 aaKnown RBP2.68□□□□□ -1.98
CHD1-211ENST00000514344 RNASEK-C17orf49H0YIS7 233 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 OR7A17O14581 309 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 UGDHO60701 494 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 TOX4O94842 621 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 FGGP02679 453 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 OPN1SWP03999 348 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 PRPS2P11908 318 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 IMPDH2P12268 514 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 CHN1P15882 459 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 EFNA1P20827 205 aaPredicted RBP2.68□□□□□ -1.98
CHD1-211ENST00000514344 UQCRC2P22695 453 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 NTSP30990 170 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 MAGEA6P43360 314 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 SERPINB4P48594 390 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 ATP6V0D1P61421 351 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 RAB1AP62820 205 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 BTKQ06187 659 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 LY6EQ16553 131 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 FXNQ16595 210 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 MMEL1Q495T6 779 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 KLHL26Q53HC5 615 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 PDZK1Q5T2W1 519 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 SLC27A4Q6P1M0 643 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 PIWIL3Q7Z3Z3 882 aaKnown RBP2.68□□□□□ -1.98
CHD1-211ENST00000514344 MTERF4Q7Z6M4 381 aaKnown RBP2.68□□□□□ -1.98
CHD1-211ENST00000514344 NDUFA11Q86Y39 141 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 ANKMY2Q8IV38 441 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 PAQR4Q8N4S7 273 aaPredicted RBP2.68□□□□□ -1.98
CHD1-211ENST00000514344 FITM2Q8N6M3 262 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 CDRT4Q8N9R6 151 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 OR6Y1Q8NGX8 325 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 MAGEE2Q8TD90 523 aaPredicted RBP2.68□□□□□ -1.98
CHD1-211ENST00000514344 IPCEF1Q8WWN9 437 aaPredicted RBP2.68□□□□□ -1.98
CHD1-211ENST00000514344 CDS1Q92903 461 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 TMEM45BQ96B21 275 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 HES6Q96HZ4 224 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 RCC1LQ96I51 464 aaKnown RBP2.68□□□□□ -1.98
CHD1-211ENST00000514344 AMDHD1Q96NU7 426 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 NSUN5Q96P11 429 aaKnown RBP2.68□□□□□ -1.98
CHD1-211ENST00000514344 PRR25Q96S07 402 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 ATOH8Q96SQ7 321 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 CCDC106Q9BWC9 280 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 RNF121Q9H920 327 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 MSL2Q9HCI7 577 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 SLCO1C1Q9NYB5 712 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 NKIRAS2Q9NYR9 191 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 ACOT9Q9Y305 439 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 HDGFL3Q9Y3E1 203 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 IGLV3-9A0A075B6K5 115 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 ZSCAN5BA6NJL1 495 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 GOLGA6L22H0YM25 854 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 PPP6CO00743 305 aa2.68□□□□□ -1.98
CHD1-211ENST00000514344 EIF1BO60739 113 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms