RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 SLC46A3Q7Z3Q1 461 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 HDDC2Q7Z4H3 204 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 FGD2Q7Z6J4 655 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 PXKQ7Z7A4 578 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 TMEM179BQ7Z7N9 219 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 UEVLDQ8IX04 471 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 CBR4Q8N4T8 237 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 LRRC17Q8N6Y2 441 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 PACRGLQ8N7B6 248 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 TMEM99Q8N816 258 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 OR52L1Q8NGH7 329 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 FNDC9Q8TBE3 224 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 MAGEE2Q8TD90 523 aaPredicted RBP9.07□□□□□ -0.96
NEDD9-214ENST00000513989 ROBO4Q8WZ75 1007 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 ZNF845Q96IR2 970 aaPredicted RBP9.07□□□□□ -0.96
NEDD9-214ENST00000513989 ZFP3Q96NJ6 502 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 VKORC1Q9BQB6 163 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 SRXN1Q9BYN0 137 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 GABARAPL1Q9H0R8 117 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 KRT84Q9NSB2 600 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 OSGIN2Q9Y236 505 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 NOX1Q9Y5S8 564 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 ADGRG4Q8IZF6 3080 aa9.07□□□□□ -0.96
NEDD9-214ENST00000513989 CCDC168Q8NDH2 2452 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 ZNF726A6NNF4 738 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 ZNF724A8MTY0 619 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 LRRN3E7EW58 273 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 C11orf98E9PRG8 122 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 MS4A18H0YCH9 400 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 H3BN98 237 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 PDLIM1O00151 329 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 AKAP8O43823 692 aaKnown RBP9.06□□□□□ -0.96
NEDD9-214ENST00000513989 FZD7O75084 574 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 HPRP00739 348 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 HMGN1P05114 100 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 YES1P07947 543 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 OSMP13725 252 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 IGFBP5P24593 272 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 POU1F1P28069 291 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 SLC6A6P31641 620 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 TIMP3P35625 211 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 AQP2P41181 271 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 DAPP51397 102 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 LSM11P83369 360 aaKnown RBP eCLIP9.06□□□□□ -0.963e-7■■□□□ 13
NEDD9-214ENST00000513989 DAG1Q14118 895 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 MS4A18Q3C1V0 323 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 EMC4Q5J8M3 183 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 KDM4DQ6B0I6 523 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 MTFR2Q6P444 385 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 FAHD1Q6P587 224 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 RPTNQ6XPR3 784 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 DPY19L2P2Q6ZN68 376 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 GALNT5Q7Z7M9 940 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 MEX3DQ86XN8 651 aaKnown RBP9.06□□□□□ -0.96
NEDD9-214ENST00000513989 CCDC103Q8IW40 242 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 CHERPQ8IWX8 916 aaKnown RBP9.06□□□□□ -0.96
NEDD9-214ENST00000513989 HS3ST5Q8IZT8 346 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 CLDN22Q8N7P3 220 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 OR13C2Q8NGS9 318 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 TEX47Q8TBZ9 253 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 FANK1Q8TC84 345 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 GMPPAQ96IJ6 420 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-214ENST00000513989 RNF122Q9H9V4 155 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 SMURF2Q9HAU4 748 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 INIPQ9NRY2 104 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 TAS2R5Q9NYW4 299 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 USE1Q9NZ43 259 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 NKX1-2Q9UD57 310 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-214ENST00000513989 BAIAP2Q9UQB8 552 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 HIF3AQ9Y2N7 669 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 EMC9Q9Y3B6 208 aa9.06□□□□□ -0.96
NEDD9-214ENST00000513989 MAGED1Q9Y5V3 778 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-214ENST00000513989 AKAP9Q99996 3911 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 F8P00451 2351 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 TRAV27A0A087WT01 109 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 IGHV3-15A0A0B4J1V0 119 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 A0A1W2PNV4 684 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 HSPB2A8KAH6 182 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 XKRYO14609 159 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 CDC42EP2O14613 210 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 CASQ2O14958 399 aaPredicted RBP9.05□□□□□ -0.96
NEDD9-214ENST00000513989 SMAD9O15198 467 aaKnown RBP9.05□□□□□ -0.96
NEDD9-214ENST00000513989 ZNHIT1O43257 154 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 KLF4O43474 513 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 IDH3BO43837 385 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 BCL10O95999 233 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 CRHP06850 196 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 CD14P08571 375 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 STSP08842 583 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 NOS3P29474 1203 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 UQCRC1P31930 480 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 CA7P43166 264 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 DAP3P51398 398 aaKnown RBP9.05□□□□□ -0.96
NEDD9-214ENST00000513989 RPS6KA3P51812 740 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 SLC16A1P53985 500 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 CTXN1P60606 82 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 RPL18Q07020 188 aaKnown RBP9.05□□□□□ -0.96
NEDD9-214ENST00000513989 PMPCAQ10713 525 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 SLC17A1Q14916 467 aa9.05□□□□□ -0.96
NEDD9-214ENST00000513989 POU4F3Q15319 338 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms