RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 OR6K6Q8NGW6 343 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 MRGPRX4Q96LA9 322 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 DCLRE1CQ96SD1 692 aaKnown RBP13.5□□□□□ -0.25
VCAN-211ENST00000513984 RERGLQ9H628 205 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 SMURF1Q9HCE7 757 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 INIPQ9NRY2 104 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 GALNT8Q9NY28 637 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 MRPL39Q9NYK5 338 aaKnown RBP13.5□□□□□ -0.25
VCAN-211ENST00000513984 ZNF346Q9UL40 294 aaKnown RBP13.5□□□□□ -0.25
VCAN-211ENST00000513984 VDAC3Q9Y277 283 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 WDFY3Q8IZQ1 3526 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 E9PI62 339 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 J3QLW9 94 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 TP53I11O14683 189 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 SELENOFO60613 162 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 IGHMP01871 453 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 RAB40ALP0C0E4 278 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 ZNF19P17023 458 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 SDC2P34741 201 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 ZNF41P51814 821 aaPredicted RBP13.5□□□□□ -0.25
VCAN-211ENST00000513984 HSF2Q03933 536 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 SNTA1Q13424 505 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 PLPPR5Q32ZL2 321 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 CCDC157Q569K6 752 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 OPN5Q6U736 354 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 TMEM91Q6ZNR0 172 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 ARMC10Q8N2F6 343 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 SYT14Q8NB59 555 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 DNAJA3Q96EY1 480 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 FRMD6Q96NE9 622 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 SNX18Q96RF0 628 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 EDEM2Q9BV94 578 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 HDHD5Q9BXW7 423 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 SPRY4Q9C004 299 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 PISDQ9UG56 409 aa13.5□□□□□ -0.25
VCAN-211ENST00000513984 NSG1A0A0A6YYJ2 146 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 PMS2P1A4D2B8 440 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 C11orf98E9PRG8 122 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 PLPP3O14495 311 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 RGS9O75916 674 aaPredicted RBP13.49□□□□□ -0.25
VCAN-211ENST00000513984 RENP00797 406 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 PYCR1P32322 319 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 HCCSP53701 268 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 ZNF45Q02386 682 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 MFSD13AQ14CX5 517 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 TRAM1Q15629 374 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 SLC6A19Q695T7 634 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 TIPARPQ7Z3E1 657 aaKnown RBP13.49□□□□□ -0.25
VCAN-211ENST00000513984 MARCH9Q86YJ5 346 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 OR2M3Q8NG83 312 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 OR2T4Q8NH00 348 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 MFSD8Q8NHS3 518 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 ZNF417Q8TAU3 575 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 ZNF519Q8TB69 540 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 MRPL48Q96GC5 212 aaKnown RBP13.49□□□□□ -0.25
VCAN-211ENST00000513984 TSSK2Q96PF2 358 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 ZNF587Q96SQ5 575 aaPredicted RBP13.49□□□□□ -0.25
VCAN-211ENST00000513984 CDC6Q99741 560 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 KCNS3Q9BQ31 491 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 TXNIPQ9H3M7 391 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 TMEM9BQ9NQ34 198 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 RYDENQ9NUL5 291 aaKnown RBP13.49□□□□□ -0.25
VCAN-211ENST00000513984 TCFL5Q9UL49 500 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 COPS3Q9UNS2 423 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 PCNX2A6NKB5 2137 aa13.49□□□□□ -0.25
VCAN-211ENST00000513984 FZD7O75084 574 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 SULT1C4O75897 302 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 CLEC2LP0C7M8 214 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 JMJD7P0C870 316 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 RPL27P61353 136 aaKnown RBP13.48□□□□□ -0.25
VCAN-211ENST00000513984 MXD1Q05195 221 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 RUNX1T1Q06455 604 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 EEF1A1P5Q5VTE0 462 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 DMKNQ6E0U4 476 aaPredicted RBP13.48□□□□□ -0.25
VCAN-211ENST00000513984 LYPD4Q6UWN0 246 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 PPP1R32Q7Z5V6 425 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 CCDC190Q86UF4 302 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 DND1Q8IYX4 353 aaKnown RBP13.48□□□□□ -0.25
VCAN-211ENST00000513984 FADS6Q8N9I5 356 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 SCAIQ8N9R8 606 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 CT55Q8WUE5 264 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 DDIT4LQ96D03 193 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 POTEKPQ9BYX7 375 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 KCNN2Q9H2S1 579 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 TPK1Q9H3S4 243 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 ZNF160Q9HCG1 818 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 QPCTLQ9NXS2 382 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 NCDNQ9UBB6 729 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 ST6GALNAC2Q9UJ37 374 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 DOCK10Q96BY6 2186 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 H7C1C5 153 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 DCTN6O00399 190 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 CTDSP2O14595 271 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 XKRYO14609 159 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 TCN2P20062 427 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 LCN6P62502 163 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 ZP4Q12836 540 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 HNRNPA0Q13151 305 aaKnown RBP13.48□□□□□ -0.25
VCAN-211ENST00000513984 ACKR1Q16570 336 aa13.48□□□□□ -0.25
VCAN-211ENST00000513984 TP53I3Q53FA7 332 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms