RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 PRDM4Q9UKN5 801 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 PROCRQ9UNN8 238 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 NOSIPQ9Y314 301 aaKnown RBP8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 EMC9Q9Y3B6 208 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 FLVCR1Q9Y5Y0 555 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 CACNA1CQ13936 2221 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 IGKV3D-15A0A087WSY6 115 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 EFCAB9A8MZ26 197 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 MS4A18H0YCH9 400 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 BLOC1S5-TXNDC5H3BN57 136 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 PLPP3O14495 311 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 TRAF3IP2O43734 574 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 ENTPD5O75356 428 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 CLDN14O95500 239 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 MT-ATP6P00846 226 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 F13BP05160 661 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 YES1P07947 543 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 POU2F1P14859 743 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 OPRM1P35372 400 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 AQP2P41181 271 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 OMPP47874 163 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 SELENOPP49908 381 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 SLC16A1P53985 500 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 CLDN17P56750 224 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 ACTR3P61158 418 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 RPL18Q07020 188 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 PUDPQ08623 228 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 TOP3AQ13472 1001 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 C1DQ13901 141 aaKnown RBP8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 TSC22D1Q15714 1073 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 MS4A18Q3C1V0 323 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 CARD17Q5XLA6 110 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 ANKRD34AQ69YU3 496 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 XKRXQ6PP77 449 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 TFAP2EQ6VUC0 442 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 CREB3L2Q70SY1 520 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 H1FNTQ75WM6 255 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 RRM2BQ7LG56 351 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 ZER1Q7Z7L7 766 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 GALNT5Q7Z7M9 940 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 UEVLDQ8IX04 471 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 ZIC4Q8N9L1 334 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 SCAIQ8N9R8 606 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF610Q8N9Z0 462 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 OR6S1Q8NH40 331 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 TXNDC15Q96J42 360 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 EMC6Q9BV81 110 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 MED29Q9NX70 200 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 EMC3Q9P0I2 261 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF629Q9UEG4 869 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 IL20RAQ9UHF4 553 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 TMCC3Q9ULS5 477 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 RASD1Q9Y272 281 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 CORINQ9Y5Q5 1042 aa8.69□□□□□ -1.02
TOPBP1-209ENST00000513818 DOPEY2Q9Y3R5 2298 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF724A8MTY0 619 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 PRSS44E7EML9 344 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 H3BNX3 289 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 GNGT2O14610 69 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 RNF13O43567 381 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 E2F6O75461 281 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 CCNB2O95067 398 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 OR6A2O95222 327 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 IL18BPO95998 194 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 CGAP01215 116 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF26P17031 533 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF43P17038 809 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 COL8A1P27658 744 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 UQCRC1P31930 480 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 CCKARP32238 428 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 ASCL1P50553 236 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 FOXG1P55316 489 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 SMIM11AP58511 58 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 TFF3Q07654 80 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 FHL1Q13642 323 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 MFSD13AQ14CX5 517 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 C9orf135Q5VTT2 229 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 GTF2IRD2BQ6EKJ0 949 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 HMBOX1Q6NT76 420 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 PGBD2Q6P3X8 592 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 NIPAL3Q6P499 406 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 BRICD5Q6PL45 260 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF474Q6S9Z5 364 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 AAED1Q7RTV5 226 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 AMIGO2Q86SJ2 522 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 GTF2IRD2Q86UP8 949 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 AQP11Q8NBQ7 271 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 PAPD5Q8NDF8 572 aaKnown RBP8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 ADPRHL1Q8NDY3 354 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 OR10G2Q8NGC3 310 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 LILRB4Q8NHJ6 448 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 LRTOMTQ8WZ04 291 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 GTPBP3Q969Y2 492 aaKnown RBP8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 OXGR1Q96P68 337 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 ALKBH3Q96Q83 286 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 TNFRSF13CQ96RJ3 184 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 RBM24Q9BX46 236 aaKnown RBP8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 MCCC2Q9HCC0 563 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 GLRX2Q9NS18 164 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 GALNT8Q9NY28 637 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms