RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, human

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX25-206	ENST00000513433	SCMH1	Q96GD3	660 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	AURKB	Q96GD4	344 aa	Predicted RBP	4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	MAGED4	Q96JG8	741 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	ANKRD27	Q96NW4	1050 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	COL21A1	Q96P44	957 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	SIGLEC12	Q96PQ1	595 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	OR7D2	Q96RA2	312 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	CGREF1	Q99674	301 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	ZNF350	Q9GZX5	532 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	OR51I1	Q9H343	314 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	LIN28A	Q9H9Z2	209 aa	Known RBP	4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	POLE3	Q9NRF9	147 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	EXD2	Q9NVH0	621 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	LRFN1	Q9P244	771 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	P2RX2	Q9UBL9	471 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	MRTO4	Q9UKD2	239 aa	Known RBP	4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	OR10H1	Q9Y4A9	318 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	CSAG2	Q9Y5P2	127 aa		4.27	□□□□□ -1.73
SNX25-206	ENST00000513433	DSPP	Q9NZW4	1301 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	MTOR	P42345	2549 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	IGLV5-52	A0A0A0MRZ9	124 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	NPIPB9	F8W1W9	429 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	TP53I11	O14683	189 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	TPD52L2	O43399	206 aa	Known RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	HS6ST1	O60243	411 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	ICOSLG	O75144	302 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	UGT2B11	O75310	529 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	PEX14	O75381	377 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	STX11	O75558	287 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	IGKV1D-16	P01601	117 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	C1QC	P02747	245 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	CCL3	P10147	92 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	ETFA	P13804	333 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	RPS4Y1	P22090	263 aa	Known RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	GABRA3	P34903	492 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	EVI2B	P34910	448 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	NUDT2	P50583	147 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	MNAT1	P51948	309 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	CRISP3	P54108	245 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	FBXW4	P57775	412 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	MTPN	P58546	118 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	DSTN	P60981	165 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	RPP38	P78345	283 aa	Known RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	HPCA	P84074	193 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	OC90	Q02509	493 aa	Predicted RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	KLRB1	Q12918	225 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	GNA13	Q14344	377 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	CAPRIN1	Q14444	709 aa	Known RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	RGN	Q15493	299 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	ARHGAP11B	Q3KRB8	267 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	RUNDC3A	Q59EK9	446 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	ZNF766	Q5HY98	468 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	GCNT6	Q5T4J0	391 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	ATAD3B	Q5T9A4	648 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	PRAMEF8	Q5VWM4	474 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	PRAMEF7	Q5VXH5	474 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	NANOGP8	Q6NSW7	305 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	RPUSD3	Q6P087	351 aa	Known RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	IL20RB	Q6UXL0	311 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	TRPM8	Q7Z2W7	1104 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	NUP54	Q7Z3B4	507 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	C16orf62	Q7Z3J2	963 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	NET1	Q7Z628	596 aa	Predicted RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	SERPINA11	Q86U17	422 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	PRR22	Q8IZ63	422 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	C10orf111	Q8N326	155 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	FAM110B	Q8TC76	370 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	PNPT1	Q8TCS8	783 aa	Known RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	SPPL2A	Q8TCT8	520 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	EFHD2	Q96C19	240 aa	Predicted RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	TMCO6	Q96DC7	493 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	OTUB1	Q96FW1	271 aa	Predicted RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	C16orf58	Q96GQ5	468 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	TMEM41A	Q96HV5	264 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	TRNT1	Q96Q11	434 aa	Known RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	SH3GL1	Q99961	368 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	GPATCH1	Q9BRR8	931 aa	Known RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	SLC39A3	Q9BRY0	314 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	IKZF5	Q9H5V7	419 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	TMEM38A	Q9H6F2	299 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	KAT8	Q9H7Z6	458 aa	Known RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	NANOG	Q9H9S0	305 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	EFCAB1	Q9HAE3	211 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	IL1RL2	Q9HB29	575 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	HHATL	Q9HCP6	504 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	A4GALT	Q9NPC4	353 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	GID8	Q9NWU2	228 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	NDE1	Q9NXR1	346 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	ANKRD10	Q9NXR5	420 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	CNIH4	Q9P003	139 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	ABCD2	Q9UBJ2	740 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	TAGLN3	Q9UI15	199 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	LIPT1	Q9Y234	373 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	OSGIN2	Q9Y236	505 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	AP3M1	Q9Y2T2	418 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	KLF13	Q9Y2Y9	288 aa	Predicted RBP	4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	WIF1	Q9Y5W5	379 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	NCKAP5	O14513	1909 aa		4.26	□□□□□ -1.73
SNX25-206	ENST00000513433	NBEAL1	Q6ZS30	2694 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms