RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 TCHHL1Q5QJ38 904 aaPredicted RBP4.1□□□□□ -1.75
HTT-211ENST00000513326 LIPMQ5VYY2 423 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 TMEM107Q6UX40 140 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 TUBA1AQ71U36 451 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 RPS27LQ71UM5 84 aaKnown RBP4.1□□□□□ -1.75
HTT-211ENST00000513326 GOLGA7Q7Z5G4 137 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 C1QL2Q7Z5L3 287 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 CMC1Q7Z7K0 106 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 ISCA2Q86U28 154 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 UEVLDQ8IX04 471 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 METTL4Q8N3J2 472 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 PNLDC1Q8NA58 520 aaKnown RBP4.1□□□□□ -1.75
HTT-211ENST00000513326 OR4C3Q8NH37 302 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 YIPF5Q969M3 257 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 DTNBP1Q96EV8 351 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 OTUB1Q96FW1 271 aaPredicted RBP4.1□□□□□ -1.75
HTT-211ENST00000513326 MS4A14Q96JA4 679 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 CENPKQ9BS16 269 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 GATA5Q9BWX5 397 aaPredicted RBP4.1□□□□□ -1.75
HTT-211ENST00000513326 TBL1XR1Q9BZK7 514 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 TRIM31Q9BZY9 425 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 RACGAP1Q9H0H5 632 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 PLK3Q9H4B4 646 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 PFDN4Q9NQP4 134 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 CA10Q9NS85 328 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 THAP1Q9NVV9 213 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 OPTCQ9UBM4 332 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 OPN4Q9UHM6 478 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 UTS2RQ9UKP6 389 aa4.1□□□□□ -1.75
HTT-211ENST00000513326 EPPK1P58107 5090 aaKnown RBP4.1□□□□□ -1.75
HTT-211ENST00000513326 IGHV1-18A0A0C4DH31 117 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 TMEM129A0AVI4 362 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 CIB4A0PJX0 185 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 C1orf226A1L170 272 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 SH3PXD2BA1X283 911 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 NPIPB13A6NJU9 1138 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 A6NLC8 198 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 NPIPB5A8MRT5 1133 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 NPIPB4C9JG80 1138 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 MCIDASD6RGH6 385 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 PDLIM1O00151 329 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 UPK1AO00322 258 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 FOXE1O00358 373 aaPredicted RBP4.09□□□□□ -1.75
HTT-211ENST00000513326 PPP6CO00743 305 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 ZNF195O14628 629 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 RGS14O43566 566 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 CYTIPO60759 359 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 GUCY1B2O75343 617 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 PSMG1O95456 288 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 OXSR1O95747 527 aaPredicted RBP4.09□□□□□ -1.75
HTT-211ENST00000513326 PNPP00491 289 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 IL3P08700 152 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 NHLRC4P0CG21 123 aaPredicted RBP4.09□□□□□ -1.75
HTT-211ENST00000513326 COL8A2P25067 703 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 TACR3P29371 465 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 GABRA3P34903 492 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 PGM1P36871 562 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 PPOXP50336 477 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 IDH3GP51553 393 aaPredicted RBP4.09□□□□□ -1.75
HTT-211ENST00000513326 RPS6KA3P51812 740 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 ARFIP1P53367 373 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 MVDP53602 400 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 RAB10P61026 200 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 LMO4P61968 165 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 IL1RL1Q01638 556 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 ZNF117Q03924 483 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 C17orf67Q0P5P2 114 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 RASGEF1BQ0VAM2 473 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 ZKSCAN8Q15776 578 aaPredicted RBP4.09□□□□□ -1.75
HTT-211ENST00000513326 ATP6AP1LQ52LC2 224 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 HIKESHIQ53FT3 197 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 CDKL4Q5MAI5 379 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 ELFN2Q5R3F8 820 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 CPTPQ5TA50 214 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 FBXW9Q5XUX1 488 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 C11orf87Q6NUJ2 197 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 CBLN3Q6UW01 205 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 ZNF771Q7L3S4 317 aaPredicted RBP4.09□□□□□ -1.75
HTT-211ENST00000513326 TBC1D1Q86TI0 1168 aaPredicted RBP4.09□□□□□ -1.75
HTT-211ENST00000513326 P2RY8Q86VZ1 359 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 ZNF100Q8IYN0 542 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 UBE2J2Q8N2K1 259 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 ZNF786Q8N393 782 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 BPIFB2Q8N4F0 458 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 C1orf52Q8N6N3 182 aaKnown RBP4.09□□□□□ -1.75
HTT-211ENST00000513326 ZFP90Q8TF47 636 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 CPNE4Q96A23 557 aaPredicted RBP4.09□□□□□ -1.75
HTT-211ENST00000513326 MUS81Q96NY9 551 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 SERPINI1Q99574 410 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 DOK1Q99704 481 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 SUCNR1Q9BXA5 334 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 RHOJQ9H4E5 214 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 MYOZ1Q9NP98 299 aaPredicted RBP4.09□□□□□ -1.75
HTT-211ENST00000513326 SLC17A5Q9NRA2 495 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 SDHAF3Q9NRP4 125 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 PAQR5Q9NXK6 330 aaPredicted RBP4.09□□□□□ -1.75
HTT-211ENST00000513326 NUDT4Q9NZJ9 180 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 GUCA1BQ9UMX6 200 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 GRIP1Q9Y3R0 1128 aa4.09□□□□□ -1.75
HTT-211ENST00000513326 TEX264Q9Y6I9 313 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms