RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ZIM2Q9NZV7 527 aa12□□□□□ -0.49
SPCS3-204ENST00000513139 TMED7Q9Y3B3 224 aa12□□□□□ -0.49
SPCS3-204ENST00000513139 SYNGR3O43761 229 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 SNX3O60493 162 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 SCN2BO60939 215 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 GAAP10253 952 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 SAGP10523 405 aaPredicted RBP11.99□□□□□ -0.49
SPCS3-204ENST00000513139 ANPEPP15144 967 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 MATN1P21941 496 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 ACHEP22303 614 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 S100A3P33764 101 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 POLR2HP52434 150 aaKnown RBP11.99□□□□□ -0.49
SPCS3-204ENST00000513139 POLR2JP52435 117 aaKnown RBP11.99□□□□□ -0.49
SPCS3-204ENST00000513139 TMEM33P57088 247 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 STX1BP61266 288 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 AGKQ53H12 422 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 ELFN2Q5R3F8 820 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 OTUD3Q5T2D3 398 aaPredicted RBP11.99□□□□□ -0.49
SPCS3-204ENST00000513139 METTL21CQ5VZV1 264 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 REP15Q6BDI9 236 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 FAHD2BQ6P2I3 314 aaPredicted RBP11.99□□□□□ -0.49
SPCS3-204ENST00000513139 TREML4Q6UXN2 200 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 C1orf229Q6ZS94 237 aaPredicted RBP11.99□□□□□ -0.49
SPCS3-204ENST00000513139 C16orf62Q7Z3J2 963 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 CDK20Q8IZL9 346 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 CLECL1Q8IZS7 167 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 OR8J2Q8NGG1 315 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 OR5AK3PQ8NH89 298 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 MRPL24Q96A35 216 aaKnown RBP11.99□□□□□ -0.49
SPCS3-204ENST00000513139 FAHD2AQ96GK7 314 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 CCT8L2Q96SF2 557 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 MS4A5Q9H3V2 200 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 SERHL2Q9H4I8 314 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 EXD2Q9NVH0 621 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 CCDC167Q9P0B6 97 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 OSGIN1Q9UJX0 560 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 TRIM33Q9UPN9 1127 aa11.99□□□□□ -0.49
SPCS3-204ENST00000513139 IGHV2OR16-5A0A0B4J2B6 119 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 AQP7P3A6NL99 342 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 NR5A2O00482 541 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 CFLARO15519 480 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 SHOX2O60902 331 aaPredicted RBP11.98□□□□□ -0.49
SPCS3-204ENST00000513139 BCAS1O75363 584 aaPredicted RBP11.98□□□□□ -0.49
SPCS3-204ENST00000513139 CPSF4O95639 269 aaKnown RBP11.98□□□□□ -0.49
SPCS3-204ENST00000513139 AGR2O95994 175 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 GPIP06744 558 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 CBR1P16152 277 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 CCNA2P20248 432 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 IDH2P48735 452 aaKnown RBP11.98□□□□□ -0.49
SPCS3-204ENST00000513139 MRPL19P49406 292 aaKnown RBP11.98□□□□□ -0.49
SPCS3-204ENST00000513139 ATP4BP51164 291 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 LMO4P61968 165 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 RPS26P62854 115 aaKnown RBP11.98□□□□□ -0.49
SPCS3-204ENST00000513139 HBA1P69905 142 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 KCNJ10P78508 379 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 MRPS11P82912 194 aaKnown RBP11.98□□□□□ -0.49
SPCS3-204ENST00000513139 C6orf120Q7Z4R8 191 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 PIGWQ7Z7B1 504 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 TMEM99Q8N816 258 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 MIPOL1Q8TD10 442 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 RDH5Q92781 318 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 VPS33AQ96AX1 596 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 OR52E6Q96RD3 313 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 LINC00470Q9BZP3 86 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 NSRP1Q9H0G5 558 aaKnown RBP11.98□□□□□ -0.49
SPCS3-204ENST00000513139 NELFAQ9H3P2 528 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 TPK1Q9H3S4 243 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 SEC61A2Q9H9S3 476 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 LPAR2Q9HBW0 351 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 G6PC2Q9NQR9 355 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 SAR1AQ9NR31 198 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 CMAHPQ9Y471 501 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 WDR45Q9Y484 360 aa11.98□□□□□ -0.49
SPCS3-204ENST00000513139 PRSS51A0A1B0GVH4 220 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 TMEM72A0PK05 275 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 LIPT2A6NK58 231 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 M0R233 179 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 FAAHO00519 579 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 VAMP5O95183 116 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 BCL10O95999 233 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 HKR1P10072 659 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 ARR3P36575 388 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 TUBA1BP68363 451 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 TUBA4AP68366 448 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 DAG1Q14118 895 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 ATAD3BQ5T9A4 648 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 TMEM225Q6GV28 225 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 TYW3Q6IPR3 259 aaKnown RBP11.97□□□□□ -0.49
SPCS3-204ENST00000513139 TUBA1AQ71U36 451 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 C1QL2Q7Z5L3 287 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 GPAT4Q86UL3 456 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 MYPOPQ86VE0 399 aaPredicted RBP11.97□□□□□ -0.49
SPCS3-204ENST00000513139 CLEC4FQ8N1N0 589 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 ZDHHC22Q8N966 263 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 GLB1L3Q8NCI6 653 aaPredicted RBP11.97□□□□□ -0.49
SPCS3-204ENST00000513139 ALKBH3Q96Q83 286 aaPredicted RBP11.97□□□□□ -0.49
SPCS3-204ENST00000513139 ESM1Q9NQ30 184 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 SLC52A3Q9NQ40 469 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.97□□□□□ -0.49
SPCS3-204ENST00000513139 TREM2Q9NZC2 230 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms