RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 PRRX1P54821 245 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 WNT7BP56706 349 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 P2RY14Q15391 338 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 GPR19Q15760 415 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 LRRC26Q2I0M4 334 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 STUMQ69YW2 141 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 FAM109BQ6ICB4 259 aaPredicted RBP8.28□□□□□ -1.08
VCAN-208ENST00000512590 CLDN22Q8N7P3 220 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 NEIL3Q8TAT5 605 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 LNX1Q8TBB1 728 aaPredicted RBP8.28□□□□□ -1.08
VCAN-208ENST00000512590 SALL4Q9UJQ4 1053 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 GFRA2O00451 464 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 DIRAS1O95057 198 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 DNAJB1P25685 340 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 AOAHP28039 575 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 UBE2KP61086 200 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 MRPS34P82930 218 aaKnown RBP8.28□□□□□ -1.08
VCAN-208ENST00000512590 HSF1Q00613 529 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 CD83Q01151 205 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 HNRNPA0Q13151 305 aaKnown RBP8.28□□□□□ -1.08
VCAN-208ENST00000512590 DOC2BQ14184 412 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 RTP2Q5QGT7 225 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 HES5Q5TA89 166 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 TMEM135Q86UB9 458 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 GRPEL2Q8TAA5 225 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 RDH12Q96NR8 316 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 NRSN2Q9GZP1 204 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 RABAC1Q9UI14 185 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 OARD1Q9Y530 152 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 IER3IP1Q9Y5U9 82 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 A0A1W2PS29 197 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 KCNE1P15382 129 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 TMEM267Q0VDI3 215 aaPredicted RBP8.28□□□□□ -1.08
VCAN-208ENST00000512590 DAG1Q14118 895 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 C19orf54Q5BKX5 351 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 ASTLQ6HA08 431 aaPredicted RBP8.28□□□□□ -1.08
VCAN-208ENST00000512590 PLBD1Q6P4A8 553 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 OR6V1Q8N148 313 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 ENDOVQ8N8Q3 282 aaKnown RBP8.28□□□□□ -1.08
VCAN-208ENST00000512590 OR5B3Q8NH48 314 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 CCDC74BQ96LY2 380 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 DPCDQ9BVM2 203 aaPredicted RBP8.28□□□□□ -1.08
VCAN-208ENST00000512590 SMIM3Q9BZL3 60 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 FZD8Q9H461 694 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 ARHGAP23Q9P227 1491 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 H3BNX3 289 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 MYOGP15173 224 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 DTYMKP23919 212 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 SLC7A9P82251 487 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 MAB21L1Q13394 359 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 CEACAM7Q14002 265 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 IHHQ14623 411 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 SPRED1Q7Z699 444 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 RTN4RL1Q86UN2 441 aaPredicted RBP8.28□□□□□ -1.08
VCAN-208ENST00000512590 SLC38A6Q8IZM9 456 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 GPR148Q8TDV2 347 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 SLC41A2Q96JW4 573 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 ALG8Q9BVK2 526 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 OR51E2Q9H255 320 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 C1orf198Q9H425 327 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 IGKV3-7A0A075B6H7 116 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 APEHP13798 732 aaKnown RBP8.28□□□□□ -1.08
VCAN-208ENST00000512590 MMP8P22894 467 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 RAB38P57729 211 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 MLF1P58340 268 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 C6orf52Q5T4I8 152 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 PDZD3Q86UT5 571 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 WDR5BQ86VZ2 330 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 SUMF2Q8NBJ7 301 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 OR5M1Q8NGP8 315 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 TRIB3Q96RU7 358 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 TMEM246Q9BRR3 403 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 ACKR4Q9NPB9 350 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 SLC17A7Q9P2U7 560 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 ADAMTS6Q9UKP5 1117 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 KCTD3Q9Y597 815 aa8.28□□□□□ -1.08
VCAN-208ENST00000512590 ZCCHC11Q5TAX3 1644 aaKnown RBP8.27□□□□□ -1.08
VCAN-208ENST00000512590 SIRPB1O00241 398 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 ARHGAP33O14559 1287 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 NXPH3O95157 252 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 ZNF865P0CJ78 1059 aaPredicted RBP8.27□□□□□ -1.08
VCAN-208ENST00000512590 RFC3P40938 356 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 SPINT3P49223 89 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 TAS2R45P59539 299 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 RIPPLY1Q0D2K3 151 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 NADK2Q4G0N4 442 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 TXNRD3NBQ6F5E7 133 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 C5orf46Q6UWT4 87 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 ZNF781Q8N8C0 355 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 C12orf42Q96LP6 360 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 PIMREGQ9BSJ6 248 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 SEC14L4Q9UDX3 406 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 PPIL1Q9Y3C6 166 aa8.27□□□□□ -1.08
VCAN-208ENST00000512590 ATRNO75882 1429 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 TRGV5A0A0B4J1U4 118 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 FAM157AC9JC47 383 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 M0R233 179 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 NFYAP23511 347 aaPredicted RBP8.27□□□□□ -1.09
VCAN-208ENST00000512590 TAS2R46P59540 309 aa8.27□□□□□ -1.09
VCAN-208ENST00000512590 ZNF260Q3ZCT1 412 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms