RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 PLK3Q9H4B4 646 aa12.78□□□□□ -0.36
CCHCR1-229ENST00000512418 TCF7L2Q9NQB0 619 aa12.78□□□□□ -0.36
CCHCR1-229ENST00000512418 SLC25A37Q9NYZ2 338 aa12.78□□□□□ -0.36
CCHCR1-229ENST00000512418 FBXO9Q9UK97 447 aaPredicted RBP12.78□□□□□ -0.36
CCHCR1-229ENST00000512418 IGKV1D-42A0A075B6H8 117 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 TRAV36DV7A0A075B6V5 113 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 LOC102725191A0A1B0GVB3 256 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 LOC390937A0A1W2PQ73 354 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 ERLIN1O75477 346 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 TGDSO95455 350 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 CBR1P16152 277 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 GRPRP30550 384 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 CALCRP30988 508 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 PPOXP50336 477 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 NCALDP61601 193 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 ARF1P84077 181 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 CDK6Q00534 326 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 GGTLC2Q14390 218 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 FAM91A1Q658Y4 838 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 REEP3Q6NUK4 255 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 BLOC1S3Q6QNY0 202 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 VHLLQ6RSH7 139 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 H1FNTQ75WM6 255 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 PHC2Q8IXK0 858 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 MSRB3Q8IXL7 192 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 ANKS4BQ8N8V4 417 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 ADPRHL1Q8NDY3 354 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 PIK3C3Q8NEB9 887 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 NFKBIDQ8NI38 313 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 TAAR8Q969N4 342 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 SPDL1Q96EA4 605 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 RSPO3Q9BXY4 272 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 SHARPINQ9H0F6 387 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 ZNF442Q9H7R0 627 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 SEC61A2Q9H9S3 476 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 GPR35Q9HC97 309 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 TESQ9UGI8 421 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 GMEB1Q9Y692 573 aa12.77□□□□□ -0.37
CCHCR1-229ENST00000512418 PHF1O43189 567 aaPredicted RBP12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 TRAF3IP2O43734 574 aaPredicted RBP12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 LMX1BO60663 402 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 ARR3P36575 388 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 IL1RL1Q01638 556 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 MFSD13AQ14CX5 517 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 CEACAM16Q2WEN9 425 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 FAM166AQ6J272 317 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 ULK3Q6PHR2 472 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 COMTD1Q86VU5 262 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 FUNDC1Q8IVP5 155 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 CCDC36Q8IYA8 594 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 TMEM123Q8N131 208 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 C10orf111Q8N326 155 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 OR6S1Q8NH40 331 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 SLC47A1Q96FL8 570 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 OR2M2Q96R28 347 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 RAB1BQ9H0U4 201 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 CRLF2Q9HC73 371 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 SELENONQ9NZV5 590 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 CCDC167Q9P0B6 97 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 VAPAQ9P0L0 249 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 SLAMF8Q9P0V8 285 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 KLHL14Q9P2G3 628 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 KCNS2Q9ULS6 477 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 CORINQ9Y5Q5 1042 aa12.76□□□□□ -0.37
CCHCR1-229ENST00000512418 A0A087WUJ7 227 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 PRORSD1PA6NEY8 169 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 VSTM5A8MXK1 200 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 ZNF99A8MXY4 864 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 TPST1O60507 370 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 CELA3BP08861 270 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 APEHP13798 732 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 NQO1P15559 274 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 SLC6A2P23975 617 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 IDH3GP51553 393 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 RGS8P57771 180 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 HGFACQ04756 655 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 NPRL3Q12980 569 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 CARTPTQ16568 116 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 GLIPR1L2Q4G1C9 344 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 PAGE3Q5JUK9 113 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 BEND6Q5SZJ8 279 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 MYPOPQ86VE0 399 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 UEVLDQ8IX04 471 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 SCAIQ8N9R8 606 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 ZNF540Q8NDQ6 660 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 BHLHE22Q8NFJ8 381 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 IL17RDQ8NFM7 739 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 ZNF837Q96EG3 531 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 ANKRD27Q96NW4 1050 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 FOXN4Q96NZ1 517 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 ZNF607Q96SK3 696 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 EPYCQ99645 322 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 EBF4Q9BQW3 602 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 PRR14Q9BWN1 585 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 TMEM38AQ9H6F2 299 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 SLC52A3Q9NQ40 469 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 CORO2BQ9UQ03 480 aa12.75□□□□□ -0.37
CCHCR1-229ENST00000512418 MALRD1Q5VYJ5 2156 aa12.74□□□□□ -0.37
CCHCR1-229ENST00000512418 TRBV5-3A0A0A0MS03 114 aa12.74□□□□□ -0.37
CCHCR1-229ENST00000512418 IGHV2OR16-5A0A0B4J2B6 119 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms