RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 FITM2Q8N6M3 262 aa14□□□□□ -0.17
DDX41-214ENST00000512334 FAM156AQ8NDB6 213 aa14□□□□□ -0.17
DDX41-214ENST00000512334 NINJ1Q92982 152 aa14□□□□□ -0.17
DDX41-214ENST00000512334 HIST1H2ACQ93077 130 aa14□□□□□ -0.17
DDX41-214ENST00000512334 PRRC1Q96M27 445 aa14□□□□□ -0.17
DDX41-214ENST00000512334 ZNF426Q9BUY5 554 aa14□□□□□ -0.17
DDX41-214ENST00000512334 AMBRA1Q9C0C7 1298 aa14□□□□□ -0.17
DDX41-214ENST00000512334 ESRP2Q9H6T0 727 aaKnown RBP14□□□□□ -0.17
DDX41-214ENST00000512334 FKRPQ9H9S5 495 aa14□□□□□ -0.17
DDX41-214ENST00000512334 NDE1Q9NXR1 346 aa14□□□□□ -0.17
DDX41-214ENST00000512334 FAM53CQ9NYF3 392 aa14□□□□□ -0.17
DDX41-214ENST00000512334 RPS6KA6Q9UK32 745 aa14□□□□□ -0.17
DDX41-214ENST00000512334 RCE1Q9Y256 329 aa14□□□□□ -0.17
DDX41-214ENST00000512334 AKAP6Q13023 2319 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 PRR14LQ5THK1 2151 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 SPG11Q96JI7 2443 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 LOC102725191A0A1B0GVB3 256 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 PDLIM1O00151 329 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 PLPP3O14495 311 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 UPK3AO75631 287 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 MT-ND1P03886 318 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 THRBP10828 461 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 HLA-DOBP13765 273 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 LOXP28300 417 aaPredicted RBP13.99□□□□□ -0.17
DDX41-214ENST00000512334 RBM34P42696 430 aaKnown RBP13.99□□□□□ -0.17
DDX41-214ENST00000512334 MNAT1P51948 309 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 ART1P52961 327 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 UGT2B15P54855 530 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 KRT72Q14CN4 511 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 SAMD4BQ5PRF9 694 aaKnown RBP13.99□□□□□ -0.17
DDX41-214ENST00000512334 CARD17Q5XLA6 110 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 HMBOX1Q6NT76 420 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 DEFB107AQ8IZN7 70 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 PFN4Q8NHR9 129 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 TMEM239Q8WW34 195 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 HS6ST2Q96MM7 605 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 CDRT15Q96T59 188 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 FNDC11Q9BVV2 318 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 RHCGQ9UBD6 479 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 ZNF229Q9UJW7 825 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 A4GNTQ9UNA3 340 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 MED31Q9Y3C7 131 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 SNX13Q9Y5W8 968 aa13.99□□□□□ -0.17
DDX41-214ENST00000512334 HRNRQ86YZ3 2850 aaPredicted RBP13.98□□□□□ -0.17
DDX41-214ENST00000512334 J3KTA2 159 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 CLOCKO15516 846 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 RNF13O43567 381 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 TRAF3IP2O43734 574 aaPredicted RBP13.98□□□□□ -0.17
DDX41-214ENST00000512334 ZNF432O94892 652 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 PLAUP00749 431 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 CD3EP07766 207 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 NCMAPQ5T1S8 102 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 ZNF704Q6ZNC4 412 aaPredicted RBP13.98□□□□□ -0.17
DDX41-214ENST00000512334 SSX8Q7RTT4 187 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 NANOGNBQ7Z5D8 188 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 PXKQ7Z7A4 578 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 GPR137CQ8N3F9 429 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 LRRC17Q8N6Y2 441 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 RBM15BQ8NDT2 890 aaKnown RBP13.98□□□□□ -0.17
DDX41-214ENST00000512334 C1orf162Q8NEQ5 155 aaPredicted RBP13.98□□□□□ -0.17
DDX41-214ENST00000512334 SGTBQ96EQ0 304 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 NSL1Q96IY1 281 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 MUS81Q96NY9 551 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 EMC6Q9BV81 110 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 LINC00470Q9BZP3 86 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 MEPEQ9NQ76 525 aaPredicted RBP13.98□□□□□ -0.17
DDX41-214ENST00000512334 MED29Q9NX70 200 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 RNF115Q9Y4L5 304 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 NOX1Q9Y5S8 564 aa13.98□□□□□ -0.17
DDX41-214ENST00000512334 ZNF726A6NNF4 738 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 B2RBV5 119 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 PIP5K1CO60331 668 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 ATE1O95260 518 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 HSD17B1P14061 328 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 MSX2P35548 267 aaPredicted RBP13.97□□□□□ -0.17
DDX41-214ENST00000512334 ROR2Q01974 943 aaKnown RBP13.97□□□□□ -0.17
DDX41-214ENST00000512334 BSPH1Q075Z2 132 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 ACKR1Q16570 336 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 KLHL24Q6TFL4 600 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 LINGO2Q7L985 606 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 SLC46A3Q7Z3Q1 461 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 CYP4Z1Q86W10 505 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 OFCC1Q8IZS5 231 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 C17orf78Q8N4C9 275 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 PIK3C3Q8NEB9 887 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 TXNDC15Q96J42 360 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 OR2M2Q96R28 347 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 C1QTNF6Q9BXI9 259 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 C20orf141Q9NUB4 165 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 MAGEL2Q9UJ55 1249 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 SAMD4AQ9UPU9 718 aaKnown RBP13.97□□□□□ -0.17
DDX41-214ENST00000512334 SLC25A15Q9Y619 301 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 V9GYQ6 96 aa13.97□□□□□ -0.17
DDX41-214ENST00000512334 SLC35F4A4IF30 521 aa13.96□□□□□ -0.17
DDX41-214ENST00000512334 DPRXA6NFQ7 191 aa13.96□□□□□ -0.17
DDX41-214ENST00000512334 BLOC1S5-TXNDC5H3BN57 136 aa13.96□□□□□ -0.17
DDX41-214ENST00000512334 M0R3G1 203 aa13.96□□□□□ -0.17
DDX41-214ENST00000512334 OR7A10O76100 309 aa13.96□□□□□ -0.17
DDX41-214ENST00000512334 ASAH2BP0C7U1 165 aa13.96□□□□□ -0.17
DDX41-214ENST00000512334 FUT1P19526 365 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms