RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 DNMT3BQ9UBC3 853 aaKnown RBP5.37□□□□□ -1.55
USP38-203ENST00000511739 TRAV27A0A087WT01 109 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ZCWPW2A0A1B0GU75 182 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 TLCD2A6NGC4 264 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 M0QZQ0 153 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 AQP7O14520 342 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 LIPCP11150 499 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 TNFRSF1BP20333 461 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 HIST1H1TP22492 207 aaPredicted RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 FDXRP22570 491 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 OR1D5P58170 312 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 C18orf21Q32NC0 220 aaPredicted RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 TMEM207Q6UWW9 146 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 OR5AS1Q8N127 324 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 NAGSQ8N159 534 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ABHD4Q8TB40 342 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 OR1E3Q8WZA6 343 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 NEIL2Q969S2 332 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 NMNAT1Q9HAN9 279 aaPredicted RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 ISYNA1Q9NPH2 558 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 UFSP2Q9NUQ7 469 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 CHRNA9Q9UGM1 479 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 GOLT1BQ9Y3E0 138 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 MROH6A6NGR9 719 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 TMEM189-UBE2V1I3L0A0 370 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 FZD7O75084 574 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 CDK1P06493 297 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 MMP12P39900 470 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 RPL13AP40429 203 aaKnown RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 PPIAP62937 165 aaKnown RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 TRA2BP62995 288 aaKnown RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 PITX1P78337 314 aaPredicted RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 GPLD1P80108 840 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 FLI1Q01543 452 aaPredicted RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 MGAT3Q09327 533 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 GK3PQ14409 553 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 CNPY1Q3B7I2 92 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 Q6ZRG5 221 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 CYP4V2Q6ZWL3 525 aaPredicted RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 NDUFAF7Q7L592 441 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 BHLHE23Q8NDY6 225 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ADAMTS19Q8TE59 1207 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 FGGYQ96C11 551 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 MS4A4AQ96JQ5 239 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 RNF170Q96K19 258 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 TECTBQ96PL2 329 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 DHRS4Q9BTZ2 278 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 RTL8AQ9BWD3 113 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 SORBS1Q9BX66 1292 aaKnown RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 IL26Q9NPH9 171 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.36□□□□□ -1.55
USP38-203ENST00000511739 C1GALT1Q9NS00 363 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 SAGE1Q9NXZ1 904 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 DEGS1O15121 323 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ZNF749O43361 778 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 SNAP29O95721 258 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 IGHV3-9P01782 118 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 CRYABP02511 175 aaKnown RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 RPA2P15927 270 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 HLA-DMAP28067 261 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 KCNJ10P78508 379 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 PIP5KL1Q5T9C9 394 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 FAM198BQ6UWH4 519 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ZNF836Q6ZNA1 936 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 FJX1Q86VR8 437 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 CATSPERDQ86XM0 798 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 SERPINA12Q8IW75 414 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 UBALD2Q8IYN6 164 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 CHDHQ8NE62 594 aaPredicted RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 CA5BP1Q8WTZ4 195 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 TCTEX1D2Q8WW35 142 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 NT5C3BQ969T7 300 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 CPNE4Q96A23 557 aaPredicted RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 TMEM230Q96A57 120 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 FAM173AQ9BQD7 235 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 TMEM208Q9BTX3 173 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 PECRQ9BY49 303 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ARV1Q9H2C2 271 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 NIPAL2Q9H841 368 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ZNF443Q9Y2A4 671 aaPredicted RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 PIGLQ9Y2B2 252 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 PTGDR2Q9Y5Y4 395 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 SLC31A2O15432 143 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ARHGEF15O94989 841 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 SPDEFO95238 335 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 SMIM17P0DL12 118 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ELAVL4P26378 380 aaKnown RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 PPT1P50897 306 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ARSDP51689 593 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 GRB2P62993 217 aaKnown RBP5.36□□□□□ -1.55
USP38-203ENST00000511739 FAM189BP81408 668 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 NUMA1Q14980 2115 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 PEA15Q15121 130 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 OR4D1Q15615 310 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 C15orf54Q8N8G6 183 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ABHD11Q8NFV4 315 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 OR56B1Q8NGI3 324 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ADAMTS16Q8TE57 1224 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 DPF1Q92782 380 aa5.36□□□□□ -1.55
USP38-203ENST00000511739 ZBTB8AQ96BR9 441 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms