RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 LRR1Q96L50 414 aa8.2□□□□□ -1.1
NR1I3-228ENST00000511676 ZNF582Q96NG8 517 aaPredicted RBP8.2□□□□□ -1.1
NR1I3-228ENST00000511676 TNFRSF13CQ96RJ3 184 aa8.2□□□□□ -1.1
NR1I3-228ENST00000511676 IL4I1Q96RQ9 567 aa8.2□□□□□ -1.1
NR1I3-228ENST00000511676 MYCBPQ99417 103 aaPredicted RBP8.2□□□□□ -1.1
NR1I3-228ENST00000511676 COPS4Q9BT78 406 aa8.2□□□□□ -1.1
NR1I3-228ENST00000511676 IFT27Q9BW83 186 aa8.2□□□□□ -1.1
NR1I3-228ENST00000511676 TAPBPLQ9BX59 468 aa8.2□□□□□ -1.1
NR1I3-228ENST00000511676 ALKBH4Q9NXW9 302 aa8.2□□□□□ -1.1
NR1I3-228ENST00000511676 HAO2Q9NYQ3 351 aa8.2□□□□□ -1.1
NR1I3-228ENST00000511676 WARS2Q9UGM6 360 aaKnown RBP8.2□□□□□ -1.1
NR1I3-228ENST00000511676 NINQ8N4C6 2090 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 TRAV27A0A087WT01 109 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 TRAV17A0A0B4J275 112 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 LRRC3CA6NJW4 275 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 LIPT2A6NK58 231 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 PRR23D1E9PI22 279 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 TLX2O43763 284 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 XPNPEP2O43895 674 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 EIF1BO60739 113 aaKnown RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 ENTPD6O75354 484 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 SMNDC1O75940 238 aaKnown RBP eCLIP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 PMS2P2O95744 297 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 IGFBP1P08833 259 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 PRR23D2P0DMB1 279 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 DBTP11182 482 aaKnown RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 DCKP27707 260 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 GTF2E2P29084 291 aaKnown RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 NOS3P29474 1203 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 FMO3P31513 532 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 MTNR1AP48039 350 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 RAC1P63000 192 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 ZNF91Q05481 1191 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 FOXO1Q12778 655 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 FOXD4Q12950 439 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 ZNF169Q14929 603 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 OR1C1Q15619 314 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 PLEKHN1Q494U1 663 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 ALG10Q5BKT4 473 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 SLC35D3Q5M8T2 416 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 CLEC12AQ5QGZ9 265 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 ZNF468Q5VIY5 522 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 LCN1P1Q5VSP4 162 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 PRAMEF20Q5VT98 475 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 XKRXQ6PP77 449 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 THSD4Q6ZMP0 1018 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 MDGA2Q7Z553 956 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 SPARTQ8N0X7 666 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 CISD2Q8N5K1 135 aaKnown RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 IQCF1Q8N6M8 205 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 RBMXL3Q8N7X1 1067 aaKnown RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 LRRC75AQ8NAA5 344 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 OR2M7Q8NG81 312 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 OR51A7Q8NH64 312 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 FAR1Q8WVX9 515 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 ZNF524Q96C55 264 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 SCMH1Q96GD3 660 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 MOGAT1Q96PD6 335 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 KLHDC3Q9BQ90 382 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 BCL7BQ9BQE9 202 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 FGF20Q9NP95 211 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 INPP5EQ9NRR6 644 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 PAK1IP1Q9NWT1 392 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 DKKL1Q9UK85 242 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 FBXL2Q9UKC9 423 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 EDARQ9UNE0 448 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 DIMT1Q9UNQ2 313 aaKnown RBP8.19□□□□□ -1.1
NR1I3-228ENST00000511676 VDAC3Q9Y277 283 aa8.19□□□□□ -1.1
NR1I3-228ENST00000511676 FLNCQ14315 2725 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 CPAMD8Q8IZJ3 1885 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 A6NIZ1 184 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 CENPBD1B2RD01 187 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 MCIDASD6RGH6 385 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 KLRC4-KLRK1H3BQV0 150 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 PLPP3O14495 311 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 ZIC3O60481 467 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 VAMP5O95183 116 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 FADS2O95864 444 aaKnown RBP8.18□□□□□ -1.1
NR1I3-228ENST00000511676 WDPCPO95876 746 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 HPNP05981 417 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 SP1P08047 785 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 HTR1AP08908 422 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 ATP6V1B1P15313 513 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 AGAP20933 346 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 PCMT1P22061 227 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 RPL4P36578 427 aaKnown RBP8.18□□□□□ -1.1
NR1I3-228ENST00000511676 RPS5P46782 204 aaKnown RBP8.18□□□□□ -1.1
NR1I3-228ENST00000511676 UQCRFS1P47985 274 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 DAP3P51398 398 aaKnown RBP8.18□□□□□ -1.1
NR1I3-228ENST00000511676 BLVRAP53004 296 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 SLC25A1P53007 311 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 RAP1BP61224 184 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 RAP1AP62834 184 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 CSNK2A1P68400 391 aaPredicted RBP8.18□□□□□ -1.1
NR1I3-228ENST00000511676 RPL18Q07020 188 aaKnown RBP8.18□□□□□ -1.1
NR1I3-228ENST00000511676 LGALS3BPQ08380 585 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 PUDPQ08623 228 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 GGTLC2Q14390 218 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 IRF3Q14653 427 aa8.18□□□□□ -1.1
NR1I3-228ENST00000511676 SMN1Q16637 294 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms