RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 SH3BGRP55822 239 aaPredicted RBP20.06■□□□□ 0.8
SNF8-209ENST00000510558 UBE2NP61088 152 aaKnown RBP20.06■□□□□ 0.8
SNF8-209ENST00000510558 ZNF544Q6NX49 715 aa20.06■□□□□ 0.8
SNF8-209ENST00000510558 ZNF613Q6PF04 617 aa20.06■□□□□ 0.8
SNF8-209ENST00000510558 PATL1Q86TB9 770 aaKnown RBP20.06■□□□□ 0.8
SNF8-209ENST00000510558 OR6T1Q8NGN1 323 aa20.06■□□□□ 0.8
SNF8-209ENST00000510558 SLC41A3Q96GZ6 507 aa20.06■□□□□ 0.8
SNF8-209ENST00000510558 TMEM43Q9BTV4 400 aa20.06■□□□□ 0.8
SNF8-209ENST00000510558 ASPNQ9BXN1 380 aa20.06■□□□□ 0.8
SNF8-209ENST00000510558 BARX1Q9HBU1 254 aaPredicted RBP20.06■□□□□ 0.8
SNF8-209ENST00000510558 ALPK2Q86TB3 2170 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 ZANQ9Y493 2812 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 RNF223E7ERA6 249 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 ATP6V1G2-DDX39BF2Z307 99 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 RPL36A-HNRNPH2H7BZ11 118 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 AKAP8O43823 692 aaKnown RBP20.05■□□□□ 0.8
SNF8-209ENST00000510558 NQO1P15559 274 aaKnown RBP20.05■□□□□ 0.8
SNF8-209ENST00000510558 ARFIP2P53365 341 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 CYLC2Q14093 348 aaPredicted RBP20.05■□□□□ 0.8
SNF8-209ENST00000510558 NPTX1Q15818 432 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 INTS11Q5TA45 600 aaKnown RBP20.05■□□□□ 0.8
SNF8-209ENST00000510558 NANOGP8Q6NSW7 305 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 ANKRD16Q6P6B7 361 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 SCAIQ8N9R8 606 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 MAGEE2Q8TD90 523 aaPredicted RBP20.05■□□□□ 0.8
SNF8-209ENST00000510558 ADAD1Q96M93 576 aaKnown RBP20.05■□□□□ 0.8
SNF8-209ENST00000510558 ZNF317Q96PQ6 595 aaPredicted RBP20.05■□□□□ 0.8
SNF8-209ENST00000510558 OR2M2Q96R28 347 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 NELFAQ9H3P2 528 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 NANOGQ9H9S0 305 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 MRGBPQ9NV56 204 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 ZNF446Q9NWS9 450 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 MOKQ9UQ07 419 aa20.05■□□□□ 0.8
SNF8-209ENST00000510558 A0A096LPE4 126 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 ARPC4-TTLL3A0A0A6YYG9 625 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 IGHV1-18A0A0C4DH31 117 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 A0A1W2PPZ6 126 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 CPSF4LA6NMK7 179 aaKnown RBP20.04■□□□□ 0.8
SNF8-209ENST00000510558 MS4A18H0YCH9 400 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 CHP2O43745 196 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 HPRP00739 348 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 CD247P20963 164 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 PAX7P23759 505 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 GZMMP51124 257 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 TUBA1BP68363 451 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 TUBA4AP68366 448 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 SF3A3Q12874 501 aaKnown RBP eCLIP20.04■□□□□ 0.81e-7■□□□□ 10.6
SNF8-209ENST00000510558 VMACQ2NL98 169 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 MS4A18Q3C1V0 323 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 ENTPD8Q5MY95 495 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 CGB2Q6NT52 195 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 DNM1P46Q6ZS02 220 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 TUBA1AQ71U36 451 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 UEVLDQ8IX04 471 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 GPR137CQ8N3F9 429 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 C10orf53Q8N6V4 93 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 ANKK1Q8NFD2 765 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 OR4D11Q8NGI4 311 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 VANGL1Q8TAA9 524 aaPredicted RBP20.04■□□□□ 0.8
SNF8-209ENST00000510558 SLC26A7Q8TE54 656 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 TAMM41Q96BW9 452 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 MOGAT1Q96PD6 335 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 SLC38A2Q96QD8 506 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 GPR35Q9HC97 309 aa20.04■□□□□ 0.8
SNF8-209ENST00000510558 HIVEP2P31629 2446 aa20.03■□□□□ 0.8
SNF8-209ENST00000510558 LRRN3E7EW58 273 aa20.03■□□□□ 0.8
SNF8-209ENST00000510558 HLA-DOBP13765 273 aa20.03■□□□□ 0.8
SNF8-209ENST00000510558 HOXB1P14653 301 aaPredicted RBP20.03■□□□□ 0.8
SNF8-209ENST00000510558 ARF1P84077 181 aaKnown RBP20.03■□□□□ 0.8
SNF8-209ENST00000510558 KLF10Q13118 480 aa20.03■□□□□ 0.8
SNF8-209ENST00000510558 PMS2P3Q13401 168 aa20.03■□□□□ 0.8
SNF8-209ENST00000510558 MMEL1Q495T6 779 aa20.03■□□□□ 0.8
SNF8-209ENST00000510558 RABL3Q5HYI8 236 aa20.03■□□□□ 0.8
SNF8-209ENST00000510558 LINC00114Q6XXX2 140 aa20.03■□□□□ 0.8
SNF8-209ENST00000510558 RBM45Q8IUH3 476 aaKnown RBP20.03■□□□□ 0.8
SNF8-209ENST00000510558 TMEM123Q8N131 208 aa20.03■□□□□ 0.8
SNF8-209ENST00000510558 PIK3C3Q8NEB9 887 aa20.03■□□□□ 0.8
SNF8-209ENST00000510558 REG4Q9BYZ8 158 aa20.03■□□□□ 0.8
SNF8-209ENST00000510558 MRPL39Q9NYK5 338 aaKnown RBP20.03■□□□□ 0.8
SNF8-209ENST00000510558 FXYD1O00168 92 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 SSX4O60224 188 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 VIMP08670 466 aaKnown RBP20.02■□□□□ 0.8
SNF8-209ENST00000510558 APOBEC3AP31941 199 aaPredicted RBP20.02■□□□□ 0.8
SNF8-209ENST00000510558 POU3F1Q03052 451 aaPredicted RBP20.02■□□□□ 0.8
SNF8-209ENST00000510558 PUDPQ08623 228 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 CEACAM16Q2WEN9 425 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 COQ5Q5HYK3 327 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 REP15Q6BDI9 236 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 WDR88Q6ZMY6 472 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 MAPK1IP1LQ8NDC0 245 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 ADAMTS16Q8TE57 1224 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 LRRC58Q96CX6 371 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 ZNF837Q96EG3 531 aaPredicted RBP20.02■□□□□ 0.8
SNF8-209ENST00000510558 SH3GL1Q99961 368 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 KCNS3Q9BQ31 491 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 CRLF2Q9HC73 371 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 SAR1AQ9NR31 198 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 CRNNQ9UBG3 495 aaPredicted RBP20.02■□□□□ 0.8
SNF8-209ENST00000510558 ARFGEF3Q5TH69 2177 aa20.02■□□□□ 0.8
SNF8-209ENST00000510558 BBIP1A8MTZ0 92 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms