RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 TMEM247A6NEH6 219 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 FRS3O43559 492 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 SLC43A1O75387 559 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 IGFBP1P08833 259 aaPredicted RBP8.99□□□□□ -0.97
DDX41-211ENST00000510171 ZNF43P17038 809 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 NCF2P19878 526 aaPredicted RBP8.99□□□□□ -0.97
DDX41-211ENST00000510171 EVX1P49640 407 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 POLR2JP52435 117 aaKnown RBP8.99□□□□□ -0.97
DDX41-211ENST00000510171 CRISP3P54108 245 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 CLDN17P56750 224 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 NPRL3Q12980 569 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 SCGB2A2Q13296 93 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 DAG1Q14118 895 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 SLC9B1Q4ZJI4 515 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 LIN52Q52LA3 116 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 COX20Q5RI15 118 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 DEF8Q6ZN54 512 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 VRK2Q86Y07 508 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 MIER2Q8N344 545 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 KDM8Q8N371 416 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 GPR137CQ8N3F9 429 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 C3orf56Q8N813 242 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 SEMA6DQ8NFY4 1073 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 OR52P1PQ8NH57 321 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 MFSD8Q8NHS3 518 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 SGMS2Q8NHU3 365 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 PNPT1Q8TCS8 783 aaKnown RBP8.99□□□□□ -0.97
DDX41-211ENST00000510171 STK35Q8TDR2 534 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 ZNF418Q8TF45 676 aaPredicted RBP8.99□□□□□ -0.97
DDX41-211ENST00000510171 SLC25A36Q96CQ1 311 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 ZMYND19Q96E35 227 aaPredicted RBP8.99□□□□□ -0.97
DDX41-211ENST00000510171 TPK1Q9H3S4 243 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 MS4A5Q9H3V2 200 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 ARMC7Q9H6L4 198 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 CACYBPQ9HB71 228 aaKnown RBP8.99□□□□□ -0.97
DDX41-211ENST00000510171 GPR35Q9HC97 309 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 HIF1ANQ9NWT6 349 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 REV1Q9UBZ9 1251 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 ZNF232Q9UNY5 417 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 RCE1Q9Y256 329 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 GRIP1Q9Y3R0 1128 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 DSPPQ9NZW4 1301 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 MALRD1Q5VYJ5 2156 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 NPIPB7O75200 414 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 ZNF432O94892 652 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 AHSA1O95433 338 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 TGDSO95455 350 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 EGR1P18146 543 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 NR4A1P22736 598 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 GTF2E2P29084 291 aaKnown RBP8.98□□□□□ -0.97
DDX41-211ENST00000510171 CRATP43155 626 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 GPR6P46095 362 aaPredicted RBP8.98□□□□□ -0.97
DDX41-211ENST00000510171 CAPZA2P47755 286 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 COMPP49747 757 aaPredicted RBP8.98□□□□□ -0.97
DDX41-211ENST00000510171 MVDP53602 400 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 DSTNP60981 165 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 STX1BP61266 288 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 ACTG1P63261 375 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 POU3F1Q03052 451 aaPredicted RBP8.98□□□□□ -0.97
DDX41-211ENST00000510171 SNTB2Q13425 540 aaKnown RBP8.98□□□□□ -0.97
DDX41-211ENST00000510171 C1DQ13901 141 aaKnown RBP8.98□□□□□ -0.97
DDX41-211ENST00000510171 LARS2Q15031 903 aaKnown RBP8.98□□□□□ -0.97
DDX41-211ENST00000510171 C6orf10Q5SRN2 563 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 AGBL2Q5U5Z8 902 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 RNF220Q5VTB9 566 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 KRT80Q6KB66 452 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 MAVSQ7Z434 540 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 MDP1Q86V88 176 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 MYPOPQ86VE0 399 aaPredicted RBP8.98□□□□□ -0.97
DDX41-211ENST00000510171 CLIP4Q8N3C7 705 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 SLC38A5Q8WUX1 472 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 GCDHQ92947 438 aaPredicted RBP8.98□□□□□ -0.97
DDX41-211ENST00000510171 TMEM186Q96B77 213 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 C7orf26Q96N11 449 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 OXGR1Q96P68 337 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 OR52B2Q96RD2 323 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 RAD21L1Q9H4I0 556 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 TPT1P8Q9HAU6 139 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 NOX3Q9HBY0 568 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 USP22Q9UPT9 525 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 SPEF1Q9Y4P9 236 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 USH1CQ9Y6N9 552 aa8.98□□□□□ -0.97
DDX41-211ENST00000510171 YLPM1P49750 1951 aaKnown RBP8.98□□□□□ -0.97
DDX41-211ENST00000510171 A0A0G2JPF8 293 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 TMEM89A2RUT3 159 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 ZNF503-AS2A6NEH8 195 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 ZNF99A8MXY4 864 aaPredicted RBP8.97□□□□□ -0.97
DDX41-211ENST00000510171 HNRNPCL2B2RXH8 293 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 HNRNPCL3B7ZW38 293 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 FTCDNL1E5RQL4 147 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 M0R233 179 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 POLR3GO15318 223 aaPredicted RBP8.97□□□□□ -0.97
DDX41-211ENST00000510171 SYNGR3O43761 229 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 HNRNPCL1O60812 293 aaKnown RBP8.97□□□□□ -0.97
DDX41-211ENST00000510171 BCHEP06276 602 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 MSMBP08118 114 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 HNRNPCL4P0DMR1 293 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 PNMTP11086 282 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 PRG2P13727 222 aa8.97□□□□□ -0.97
DDX41-211ENST00000510171 ETFAP13804 333 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms