RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 ANKK1Q8NFD2 765 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 RDH5Q92781 318 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 YIPF5Q969M3 257 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 FAHD2AQ96GK7 314 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 RACGAP1Q9H0H5 632 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF275Q9NSD4 429 aaPredicted RBP13.75□□□□□ -0.21
CXCL1-202ENST00000509101 BTNL2Q9UIR0 455 aa13.75□□□□□ -0.21
CXCL1-202ENST00000509101 TRRAPQ9Y4A5 3859 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 LOC105371242A0A075B767 164 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 A0A096LPI6 279 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 CCDC154A6NI56 674 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF99A8MXY4 864 aaPredicted RBP13.74□□□□□ -0.21
CXCL1-202ENST00000509101 PPIHO43447 177 aaKnown RBP13.74□□□□□ -0.21
CXCL1-202ENST00000509101 ITM2AO43736 263 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 HLA-HP01893 362 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 GSNP06396 782 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 BPGMP07738 259 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 RPS5P46782 204 aaKnown RBP13.74□□□□□ -0.21
CXCL1-202ENST00000509101 SEC24CP53992 1094 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 NME5P56597 212 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 MAPK11Q15759 364 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 C1orf229Q6ZS94 237 aaPredicted RBP13.74□□□□□ -0.21
CXCL1-202ENST00000509101 USP43Q70EL4 1123 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 TRIML2Q8N7C3 387 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 IL17RDQ8NFM7 739 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 OR52P1PQ8NH57 321 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 MFSD8Q8NHS3 518 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 STK35Q8TDR2 534 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 PANX1Q96RD7 426 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 PTDSS2Q9BVG9 487 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 PARD6BQ9BYG5 372 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 MS4A5Q9H3V2 200 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 MYEF2Q9P2K5 600 aaKnown RBP13.74□□□□□ -0.21
CXCL1-202ENST00000509101 B3GAT1Q9P2W7 334 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 FZR1Q9UM11 496 aa13.74□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF443Q9Y2A4 671 aaPredicted RBP13.74□□□□□ -0.21
CXCL1-202ENST00000509101 DSPPQ9NZW4 1301 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 TRAV20A0A0B4J274 112 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 NCR1O76036 304 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 CD79AP11912 226 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 EVX1P49640 407 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 ARFIP2P53365 341 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 TXNL4AP83876 142 aaKnown RBP13.73□□□□□ -0.21
CXCL1-202ENST00000509101 C1DQ13901 141 aaKnown RBP13.73□□□□□ -0.21
CXCL1-202ENST00000509101 CHI3L2Q15782 390 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 GSG1Q2KHT4 349 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 AWAT1Q58HT5 328 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF621Q6ZSS3 439 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 SERPINA11Q86U17 422 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 LRP11Q86VZ4 500 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 LRRC34Q8IZ02 419 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 PKNOX2Q96KN3 472 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 TEX37Q96LM6 180 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 OR2M2Q96R28 347 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 JMJD8Q96S16 334 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 P2RX2Q9UBL9 471 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 NOX1Q9Y5S8 564 aa13.73□□□□□ -0.21
CXCL1-202ENST00000509101 M0R3G1 203 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 AVPP01185 164 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 BCHEP06276 602 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 LIMS1P48059 325 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 LMO4P61968 165 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 EGR4Q05215 589 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 PIGFQ07326 219 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 TRMT5Q32P41 509 aaKnown RBP13.72□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF311Q5JNZ3 666 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 RPS26P11Q5JNZ5 115 aaPredicted RBP13.72□□□□□ -0.21
CXCL1-202ENST00000509101 PHYHD1Q5SRE7 291 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 GKAP1Q5VSY0 366 aaPredicted RBP13.72□□□□□ -0.21
CXCL1-202ENST00000509101 RNF220Q5VTB9 566 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 CARD17Q5XLA6 110 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 REP15Q6BDI9 236 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 CCDC36Q8IYA8 594 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 TMEM123Q8N131 208 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 CLIP4Q8N3C7 705 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 RIBC1Q8N443 379 aaPredicted RBP13.72□□□□□ -0.21
CXCL1-202ENST00000509101 PIK3C3Q8NEB9 887 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 KTI12Q96EK9 354 aaPredicted RBP13.72□□□□□ -0.21
CXCL1-202ENST00000509101 OXGR1Q96P68 337 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 SLC6A7Q99884 636 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 SUCNR1Q9BXA5 334 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 G6PC2Q9NQR9 355 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 B3GNT2Q9NY97 397 aa13.72□□□□□ -0.21
CXCL1-202ENST00000509101 A0A1W2PPW3 197 aa13.71□□□□□ -0.21
CXCL1-202ENST00000509101 M0R082 166 aa13.71□□□□□ -0.21
CXCL1-202ENST00000509101 AIM2O14862 343 aa13.71□□□□□ -0.21
CXCL1-202ENST00000509101 TRAF3IP2O43734 574 aaPredicted RBP13.71□□□□□ -0.21
CXCL1-202ENST00000509101 AKAP8O43823 692 aaKnown RBP13.71□□□□□ -0.21
CXCL1-202ENST00000509101 RP2O75695 350 aa13.71□□□□□ -0.21
CXCL1-202ENST00000509101 NAT2P11245 290 aa13.71□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF35P13682 527 aa13.71□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF14P17017 642 aaPredicted RBP13.71□□□□□ -0.21
CXCL1-202ENST00000509101 GLRXP35754 106 aa13.71□□□□□ -0.21
CXCL1-202ENST00000509101 UFM1P61960 85 aa13.71□□□□□ -0.21
CXCL1-202ENST00000509101 RPS23P62266 143 aaKnown RBP13.71□□□□□ -0.21
CXCL1-202ENST00000509101 HOXC5Q00444 222 aa13.71□□□□□ -0.21
CXCL1-202ENST00000509101 LARS2Q15031 903 aaKnown RBP13.71□□□□□ -0.21
CXCL1-202ENST00000509101 ALKBH6Q3KRA9 238 aa13.71□□□□□ -0.21
CXCL1-202ENST00000509101 ZNF813Q6ZN06 617 aa13.71□□□□□ -0.21
CXCL1-202ENST00000509101 NUDCD3Q8IVD9 361 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms