RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 GLRXP35754 106 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 CLDN8P56748 225 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 ARF1P84077 181 aaKnown RBP8.05□□□□□ -1.12
NEDD9-211ENST00000508546 EPS8Q12929 822 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 PCLAFQ15004 111 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 OCLNQ16625 522 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 TUSC1Q2TAM9 212 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 GPAT3Q53EU6 434 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 PRAMEF8Q5VWM4 474 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 PRAMEF7Q5VXH5 474 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 SAXO2Q658L1 398 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 TNFAIP8L2Q6P589 184 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-211ENST00000508546 MDP1Q86V88 176 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 LSRQ86X29 649 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF440Q8IYI8 595 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 BPIFB2Q8N4F0 458 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 FNDC5Q8NAU1 212 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 OR4M2Q8NGB6 313 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 OR8J2Q8NGG1 315 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 C3orf30Q96M34 536 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 TAPBPLQ9BX59 468 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 SLC38A1Q9H2H9 487 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF385DQ9H6B1 395 aa8.05□□□□□ -1.12
NEDD9-211ENST00000508546 DOCK11Q5JSL3 2073 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 A8MVM7 634 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 NPHS1O60500 1241 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 SCN2BO60939 215 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 NPIPB7O75200 414 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 DEAF1O75398 565 aaPredicted RBP8.04□□□□□ -1.12
NEDD9-211ENST00000508546 NCR1O76036 304 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 FSHBP01225 129 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 CHRM4P08173 479 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 ARAFP10398 606 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 G6PDP11413 515 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF35P13682 527 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 TCN1P20061 433 aaPredicted RBP8.04□□□□□ -1.12
NEDD9-211ENST00000508546 RPS4Y1P22090 263 aaKnown RBP8.04□□□□□ -1.12
NEDD9-211ENST00000508546 UQCRC2P22695 453 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 GATA3P23771 443 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 FPR2P25090 351 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 ALDH3B1P43353 468 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 SEC24CP53992 1094 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 RPS23P62266 143 aaKnown RBP8.04□□□□□ -1.12
NEDD9-211ENST00000508546 HPCAP84074 193 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 GNA13Q14344 377 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 PGS1Q32NB8 556 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 MMEL1Q495T6 779 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF311Q5JNZ3 666 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 MRPL2Q5T653 305 aaKnown RBP8.04□□□□□ -1.12
NEDD9-211ENST00000508546 OR4F3Q6IEY1 312 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 HMGN2P46Q86SG4 172 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 OR4A15Q8NGL6 344 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 RAB39BQ96DA2 213 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 NEURL3Q96EH8 262 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF75AQ96N20 296 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 TRNT1Q96Q11 434 aaKnown RBP8.04□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF665Q9H7R5 613 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 GPR35Q9HC97 309 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 B3GNT2Q9NY97 397 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 TANC2Q9HCD6 1990 aa8.04□□□□□ -1.12
NEDD9-211ENST00000508546 A0A096LPI6 279 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 PRSS51A0A1B0GVH4 220 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 TMEM120BA0PK00 339 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 POM121CA8CG34 1229 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF99A8MXY4 864 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 HMGN4O00479 90 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 COPEO14579 308 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 PLPP2O43688 288 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 SHOX2O60902 331 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 FZD7O75084 574 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 SLC43A1O75387 559 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 PRSS23O95084 383 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 TFPTP0C1Z6 253 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 IL7RP16871 459 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF14P17017 642 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF43P17038 809 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 ADRA2CP18825 462 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 PRTN3P24158 256 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 MDH1P40925 334 aaKnown RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 CLDN17P56750 224 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 GNGT1P63211 74 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 TXNL4AP83876 142 aaKnown RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 BNIP2Q12982 314 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 MAD2L1Q13257 205 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 FXNQ16595 210 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 GSG1Q2KHT4 349 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 CEACAM16Q2WEN9 425 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 TRMT5Q32P41 509 aaKnown RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 C1orf140Q5VVS0 124 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 DCAF12L2Q5VW00 463 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 WBP2NLQ6ICG8 309 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 LRRC74BQ6ZQY2 392 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 ZCCHC23Q6ZST2 131 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 C4orf33Q8N1A6 199 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 GPR137CQ8N3F9 429 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 SYT14Q8NB59 555 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 MFSD8Q8NHS3 518 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 RNF217Q8TC41 542 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 STK35Q8TDR2 534 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 DVL3Q92997 716 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms