RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 TSFMP43897 325 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SLC9A3P48764 834 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 TGM4P49221 684 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF763Q0D2J5 394 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 NTRK2Q16620 822 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CHRFAM7AQ494W8 412 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 DCAF10Q5QP82 559 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 NANOGP8Q6NSW7 305 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 IGFN1Q86VF2 1251 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SULF2Q8IWU5 870 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OR8H3Q8N146 312 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF511Q8NB15 262 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OR10A6Q8NH74 314 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 HTRA1Q92743 480 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PEX13Q92968 403 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OXNAD1Q96HP4 312 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SMIM14Q96QK8 99 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 C1QTNF6Q9BXI9 259 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 GPR61Q9BZJ8 451 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ELOVL3Q9HB03 270 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OR14J1Q9UGF5 321 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 GNG8Q9UK08 70 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CAPN6Q9Y6Q1 641 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 MYLKQ15746 1914 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CXorf51AA0A1B0GTR3 108 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 MEIOCA2RUB1 952 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SAGE2PA6NJ88 616 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 LRRN3E7EW58 273 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 J3QLW9 94 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 TSPAN4O14817 238 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 EMC8O43402 210 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SSX5O60225 188 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PNMTP11086 282 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CD1EP15812 388 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF19P17023 458 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 AHRP35869 848 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ARR3P36575 388 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SNCAP37840 140 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ALDH3B1P43353 468 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PRKXP51817 358 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 GAMTQ14353 236 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 RBM48Q5RL73 367 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 NIPAL3Q6P499 406 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 HAGHLQ6PII5 290 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PLET1Q6UQ28 207 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ETV3LQ6ZN32 361 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 MISPQ8IVT2 679 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CDH26Q8IXH8 852 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 FAM109AQ8N4B1 249 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 HUS1BQ8NHY5 278 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 GEMIN6Q8WXD5 167 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 UFD1Q92890 307 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CENPNQ96H22 339 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 METTL2AQ96IZ6 378 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 AKR1E2Q96JD6 320 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF471Q9BX82 626 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 MARCH7Q9H992 704 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PDFQ9HBH1 243 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 DMRT3Q9NQL9 472 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SLC39A9Q9NUM3 307 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SPANXCQ9NY87 97 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 TAS2R16Q9NYV7 291 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 GNG12Q9UBI6 72 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PDE10AQ9Y233 779 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CCL27Q9Y4X3 112 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 IGHV3-15A0A0B4J1V0 119 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 SLC35F4A4IF30 521 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 EDIL3O43854 480 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 CBX6O95503 412 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 SERPINA6P08185 405 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 AOAHP28039 575 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 CD68P34810 354 aaPredicted RBP2.71□□□□□ -1.97
NEDD4-208ENST00000508342 MAGEA5P43359 124 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 PITPNAQ00169 270 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 CDK6Q00534 326 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 FADDQ13158 208 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 GNMTQ14749 295 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 BAK1Q16611 211 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 GLT8D1Q68CQ7 371 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 BAIAP2L2Q6UXY1 529 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 ERI1Q8IV48 349 aaKnown RBP2.71□□□□□ -1.97
NEDD4-208ENST00000508342 POC1BQ8TC44 478 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 PYDC1Q8WXC3 89 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 NR4A3Q92570 626 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 SLC7A6OSQ96CW6 309 aaPredicted RBP2.71□□□□□ -1.97
NEDD4-208ENST00000508342 ERMAPQ96PL5 475 aaPredicted RBP2.71□□□□□ -1.97
NEDD4-208ENST00000508342 ADOQ96SZ5 270 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 SORBS1Q9BX66 1292 aaKnown RBP2.71□□□□□ -1.97
NEDD4-208ENST00000508342 OR10A2Q9H208 303 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 UNKLQ9H9P5 680 aaKnown RBP2.71□□□□□ -1.97
NEDD4-208ENST00000508342 POPDC3Q9HBV1 291 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 PAQR5Q9NXK6 330 aaPredicted RBP2.71□□□□□ -1.97
NEDD4-208ENST00000508342 NINJ2Q9NZG7 142 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 C5AR2Q9P296 337 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 TUBD1Q9UJT1 453 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF221Q9UK13 617 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 SLC7A7Q9UM01 511 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 UBE2J1Q9Y385 318 aaPredicted RBP2.71□□□□□ -1.97
NEDD4-208ENST00000508342 LIPGQ9Y5X9 500 aa2.71□□□□□ -1.97
NEDD4-208ENST00000508342 NFS1Q9Y697 457 aa2.71□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms