RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 GLRX2Q9NS18 164 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 SLC25A15Q9Y619 301 aa2.74□□□□□ -1.97
HMGB1P28-201ENST00000507778 PPIAL4EA0A075B759 164 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 A0A0G2JLM5 398 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 A0A0G2JN53 185 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 A0A1B0GUA9 196 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 PINLYPA6NC86 204 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 C12orf71A8MTZ7 269 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 C12orf77C9JDV5 145 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 PANO1I0J062 215 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 TRAF3IP2O43734 574 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 TNFSF13O75888 250 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 NDUFB10O96000 172 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 FGF1P05230 155 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 UBTFL1P0CB47 393 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 PPIAL4FP0DN26 164 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 MCF2P10911 925 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 NR2C1P13056 603 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 HPGDP15428 266 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 ZNF17P17021 662 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 BTCP35070 178 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 CYTH1Q15438 398 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 SSX2Q16385 188 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 KCTD21Q4G0X4 260 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 CTRB2Q6GPI1 263 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 C6orf89Q6UWU4 347 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 KDM7AQ6ZMT4 941 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 TAS2R42Q7RTR8 314 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 FAM71E2Q8N5Q1 922 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 OR4F6Q8NGB9 312 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 OR9K2Q8NGE7 335 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 RDH5Q92781 318 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 FGF14Q92915 247 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 SMARCD2Q92925 531 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 STMN2Q93045 179 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 TUBGCP3Q96CW5 907 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 TPD52L3Q96J77 140 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 C12orf42Q96LP6 360 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 MS4A4EQ96PG1 132 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 TCHPQ9BT92 498 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 FAIM2Q9BWQ8 316 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 SRMSQ9H3Y6 488 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 METTL7AQ9H8H3 244 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 MRPL47Q9HD33 250 aaKnown RBP2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 ETNK2Q9NVF9 386 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 EXD2Q9NVH0 621 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 CALYQ9NYX4 217 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 CLCF1Q9UBD9 225 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 SLC7A8Q9UHI5 535 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 ZNF225Q9UK10 706 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 IKZF2Q9UKS7 526 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 CACNG2Q9Y698 323 aa2.73□□□□□ -1.97
HMGB1P28-201ENST00000507778 IGLV3-22A0A075B6J6 115 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 A0A1W2PPV9 198 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 UBXN8O00124 270 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 ERLIN2O94905 339 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 KRT6AP02538 564 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 GAPDHP04406 335 aaKnown RBP2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 PBLDP30039 288 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 CASP14P31944 242 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 VHLP40337 213 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 CRYBB2P43320 205 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 YAP1P46937 504 aaKnown RBP2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 ZNF133P52736 654 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 PPIL2Q13356 520 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 UNC119Q13432 240 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 GPNMBQ14956 572 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 MPPED2Q15777 294 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 ACP7Q6ZNF0 438 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 KRTAP11-1Q8IUC1 163 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 PSTKQ8IV42 348 aaKnown RBP2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 SLC22A9Q8IVM8 553 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 MKXQ8IYA7 352 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 TMEM61Q8N0U2 210 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 SDR9C7Q8NEX9 313 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 OR1N2Q8NGR9 330 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 OR8B4Q96RC9 309 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 MYCBPQ99417 103 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 SORT1Q99523 831 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 EML4Q9HC35 981 aaKnown RBP2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 ADAP2Q9NPF8 381 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 CCL28Q9NRJ3 127 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 NUFIP1Q9UHK0 495 aaKnown RBP2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 RRP15Q9Y3B9 282 aaKnown RBP2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 MEGF6O75095 1541 aa2.72□□□□□ -1.97
HMGB1P28-201ENST00000507778 PDS5BQ9NTI5 1447 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 KIR2DL5BA0A0G2JN68 375 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 KIR2DL5BA0A0G2JPC4 375 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 XKRY2A2RUG3 117 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 CCL21O00585 134 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 PSTPIP1O43586 416 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 MGRN1O60291 552 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 C1orf105O95561 183 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 TMEM50AO95807 157 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 TDGF1P13385 188 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 MGMTP16455 207 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 CRISP2P16562 243 aa2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 RCC1P18754 421 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 TCN1P20061 433 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P28-201ENST00000507778 KITLGP21583 273 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms