RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ITGB2P05107 769 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 ADH1AP07327 375 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 GP1BAP07359 652 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 PTHLHP12272 177 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 SPI1P17947 270 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 ADRA2CP18825 462 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 PEBP1P30086 187 aaKnown RBP16.23■□□□□ 0.19
NUP54-205ENST00000507257 SORDQ00796 357 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 TOMM20Q15388 145 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 ZNF227Q86WZ6 799 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 COL26A1Q96A83 441 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 SERINC2Q96SA4 455 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 YBX2Q9Y2T7 364 aaKnown RBP16.23■□□□□ 0.19
NUP54-205ENST00000507257 GGT3PA6NGU5 568 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 H7C2Y5 167 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 RLN1P04808 185 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 PCCBP05166 539 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 SMIM10L1P0DMW3 83 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 ADH5P11766 374 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 SLC25A4P12235 298 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 RPS15AP62244 130 aaKnown RBP16.23■□□□□ 0.19
NUP54-205ENST00000507257 CNKSR3Q6P9H4 555 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 VN1R4Q7Z5H5 301 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 SMIM10Q96HG1 83 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 CCDC86Q9H6F5 360 aaKnown RBP16.23■□□□□ 0.19
NUP54-205ENST00000507257 SLC17A5Q9NRA2 495 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 TAS2R3Q9NYW6 316 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 IER3IP1Q9Y5U9 82 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 NUP210LQ5VU65 1888 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 TP53BP1Q12888 1972 aaPredicted RBP16.22■□□□□ 0.19
NUP54-205ENST00000507257 TRBV5-7A0A0A0MS05 114 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 LDB3O75112 727 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 ATG12O94817 140 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 NGFRP08138 427 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 TLX1P31314 330 aaPredicted RBP16.22■□□□□ 0.19
NUP54-205ENST00000507257 P2RY2P41231 377 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 DEFA5Q01523 94 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 OC90Q02509 493 aaPredicted RBP16.22■□□□□ 0.19
NUP54-205ENST00000507257 ALKBH1Q13686 389 aaKnown RBP16.22■□□□□ 0.19
NUP54-205ENST00000507257 STK11Q15831 433 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 FNDC3BQ53EP0 1204 aaKnown RBP16.22■□□□□ 0.19
NUP54-205ENST00000507257 DEFB128Q7Z7B8 93 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 ZNF595Q8IYB9 648 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 BPIFCQ8NFQ6 507 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 ZNF417Q8TAU3 575 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 GRHL3Q8TE85 626 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 PXYLP1Q8TE99 480 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 THRSPQ92748 146 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 SLC7A5P2Q9GIP4 190 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 SLC39A1Q9NY26 324 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 STEAP1Q9UHE8 339 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 GPN3Q9UHW5 284 aaPredicted RBP16.22■□□□□ 0.19
NUP54-205ENST00000507257 MRTO4Q9UKD2 239 aaKnown RBP16.22■□□□□ 0.19
NUP54-205ENST00000507257 TICRRQ7Z2Z1 1910 aa16.22■□□□□ 0.19
NUP54-205ENST00000507257 AK4P27144 223 aaPredicted RBP16.21■□□□□ 0.19
NUP54-205ENST00000507257 ACAA2P42765 397 aaKnown RBP16.21■□□□□ 0.19
NUP54-205ENST00000507257 MELKQ14680 651 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 HFEQ30201 348 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 TRMT12Q53H54 448 aaKnown RBP16.21■□□□□ 0.19
NUP54-205ENST00000507257 LINC01590Q5TEZ4 76 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 C11orf88Q6PI97 169 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 ZNF546Q86UE3 836 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 HOXB13Q92826 284 aaPredicted RBP16.21■□□□□ 0.19
NUP54-205ENST00000507257 GPX7Q96SL4 187 aaPredicted RBP16.21■□□□□ 0.19
NUP54-205ENST00000507257 SLC25A21Q9BQT8 299 aaPredicted RBP16.21■□□□□ 0.19
NUP54-205ENST00000507257 SAV1Q9H4B6 383 aaPredicted RBP16.21■□□□□ 0.19
NUP54-205ENST00000507257 FBXO34Q9NWN3 711 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 A0A1B0GTI1 187 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 PQLC2LA1A4F0 135 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 MCIDASD6RGH6 385 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 C1QTNF3-AMACRE9PGA6 284 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 SULT1C2O00338 296 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 BCL2L11O43521 198 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 UPK3AO75631 287 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 ZNF888P0CJ79 500 aaPredicted RBP16.21■□□□□ 0.19
NUP54-205ENST00000507257 COL9A2Q14055 689 aaPredicted RBP16.21■□□□□ 0.19
NUP54-205ENST00000507257 ALG10BQ5I7T1 473 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 LY6G6FQ5SQ64 297 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 JMJD6Q6NYC1 403 aaPredicted RBP16.21■□□□□ 0.19
NUP54-205ENST00000507257 FAM220AQ7Z4H9 259 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 CLEC1AQ8NC01 280 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 RELL2Q8NC24 303 aaPredicted RBP16.21■□□□□ 0.19
NUP54-205ENST00000507257 OR51L1Q8NGJ5 315 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 OR5AK2Q8NH90 309 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 CCDC74AQ96AQ1 378 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 SEMA4CQ9C0C4 833 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 TMEM138Q9NPI0 162 aa16.21■□□□□ 0.19
NUP54-205ENST00000507257 LTBP2Q14767 1821 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 NPIPA5A0A0B4J1W7 369 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 KANTRA0A1W2PQU2 76 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 PCP4L1A6NKN8 68 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 TTLL8A6PVC2 850 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 HSPB2A8KAH6 182 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 PRRT4C9JH25 899 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 NPIPA7E9PJI5 369 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 CTAG2O75638 210 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 RASGRP1O95267 797 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 NPIPA8P0DM63 369 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 TMIGD3P0DMS9 266 aaPredicted RBP16.2■□□□□ 0.18
NUP54-205ENST00000507257 STARP49675 285 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms