RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 FAM182AQ5T1J6 154 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 HENMT1Q5T8I9 393 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 PRAMEF8Q5VWM4 474 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 TMEM215Q68D42 235 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 HIST2H2AA3Q6FI13 130 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 RAET1GQ6H3X3 334 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 PNCKQ6P2M8 343 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 EPGNQ6UW88 154 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 UNC5DQ6UXZ4 953 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 TMEM64Q6YI46 380 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 RNF165Q6ZSG1 346 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 Q71RC1 249 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 HSD11B1LQ7Z5J1 315 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 AMZ2Q86W34 360 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 RNF130Q86XS8 419 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 CACUL1Q86Y37 369 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 MMAAQ8IVH4 418 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 PIANPQ8IYJ0 282 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 CPNE9Q8IYJ1 553 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 HDDC3Q8N4P3 179 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 CLDN19Q8N6F1 224 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 SIDT2Q8NBJ9 832 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 OR52B6Q8NGF0 335 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 OR56A4Q8NGH8 313 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 OR2T3Q8NH03 318 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 CD200R1Q8TD46 325 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 RNASE8Q8TDE3 154 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 GPR148Q8TDV2 347 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 GANCQ8TET4 914 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 NPRL2Q8WTW4 380 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 EEF1AKMT1Q8WVE0 214 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 ANKRD49Q8WVL7 239 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 C10orf82Q8WW14 230 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 STARD8Q92502 1023 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 FAM3CQ92520 227 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 ELMO1Q92556 727 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 FGF14Q92915 247 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 STMN2Q93045 179 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 POP5Q969H6 163 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 UBE2E3Q969T4 207 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 ATP6V1E2Q96A05 226 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 MCUR1Q96AQ8 359 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 NUS1Q96E22 293 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 DTD2Q96FN9 168 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 PPP3R2Q96LZ3 170 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 SERPINI1Q99574 410 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 GPR21Q99679 349 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 GABRG3Q99928 467 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 NTMT1Q9BV86 223 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 RIOK2Q9BVS4 552 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 PCBD2Q9H0N5 130 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 ABCG8Q9H221 673 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 C1orf21Q9H246 121 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 POMKQ9H5K3 350 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 COG4Q9H9E3 785 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 EFCAB1Q9HAE3 211 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 SGK2Q9HBY8 427 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 S100A14Q9HCY8 104 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 HPS4Q9NQG7 708 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 FBXL12Q9NXK8 326 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 OPTCQ9UBM4 332 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 PSORS1C1Q9UIG5 152 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 EMCNQ9ULC0 261 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 SNX6Q9UNH7 406 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 RRP15Q9Y3B9 282 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 OARD1Q9Y530 152 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 FADS3Q9Y5Q0 445 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 PATJQ8NI35 1801 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 NLRC5Q86WI3 1866 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 MYH10P35580 1976 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 PDE4DIPQ5VU43 2346 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 CACNA1AO00555 2505 aa2.05□□□□□ -2.08
TOPBP1-205ENST00000506779 C15orf38-AP3S2A0A0A6YYH1 394 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 C13orf42A0A1B0GVH6 325 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 MGAT4DA6NG13 374 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 EPOPA6NHQ4 379 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 NCF1BA6NI72 391 aaPredicted RBP2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 IQCF5A8MTL0 148 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 BBIP1A8MTZ0 92 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 NCF1CA8MVU1 366 aaPredicted RBP2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 SHISA9B4DS77 424 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 PRAMEF26H0Y7S4 382 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 GFYI3L273 518 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 K7EQS6 105 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 UBXN8O00124 270 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 PSMD12O00232 456 aaPredicted RBP2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 CDC7O00311 574 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 CCL22O00626 93 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 E2F3O00716 465 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 MBTPS2O43462 519 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 BCL2L11O43521 198 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 FMO6PO60774 539 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 PSIP1O75475 530 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 GMNNO75496 209 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 POP7O75817 140 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 CIB2O75838 187 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 MYO1DO94832 1006 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 CLDN9O95484 217 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 APBB3O95704 486 aa2.04□□□□□ -2.08
TOPBP1-205ENST00000506779 TSPAN12O95859 305 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms