RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ZNF229Q9UJW7 825 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 CREBBPQ92793 2442 aa16.08■□□□□ 0.16
PDLIM7-216ENST00000506537 ABCA4P78363 2273 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 IGF2P01344 180 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 LOXP28300 417 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 IL1RL1Q01638 556 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 NIPAL3Q6P499 406 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 SEZ6L2Q6UXD5 910 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 LINGO2Q7L985 606 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 ARHGAP24Q8N264 748 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 PYURFQ96I23 114 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 CLPTM1LQ96KA5 538 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 HS6ST2Q96MM7 605 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 FNDC11Q9BVV2 318 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 C1orf21Q9H246 121 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 CLEC4MQ9H2X3 399 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 NANSQ9NR45 359 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 ZNF226Q9NYT6 803 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 TAS2R5Q9NYW4 299 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 RCE1Q9Y256 329 aa16.07■□□□□ 0.16
PDLIM7-216ENST00000506537 TEP1Q99973 2627 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 hCG_2039718K7EN88 272 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 CASKO14936 926 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 OR7A10O76100 309 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 DIRAS1O95057 198 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 DNAJA1P31689 397 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 POU3F1Q03052 451 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 C1DQ13901 141 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 TRAM2Q15035 370 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 TAB1Q15750 504 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 C9orf135Q5VTT2 229 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 CYP2R1Q6VVX0 501 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 WFDC8Q8IUA0 241 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 UEVLDQ8IX04 471 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 PIK3C3Q8NEB9 887 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 NRGNQ92686 78 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 SGTBQ96EQ0 304 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 TXNDC15Q96J42 360 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 ALKBH3Q96Q83 286 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 POLDIP3Q9BY77 421 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 MED29Q9NX70 200 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 TAS2R16Q9NYV7 291 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 ACTR3BQ9P1U1 418 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 UPB1Q9UBR1 384 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 PRPF19Q9UMS4 504 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 MED31Q9Y3C7 131 aa16.06■□□□□ 0.16
PDLIM7-216ENST00000506537 ANKRD17O75179 2603 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 C11orf98E9PRG8 122 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 KLF4O43474 513 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 UPK3AO75631 287 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 RAD51DO75771 328 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 GOSR1O95249 250 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 ADORA3P0DMS8 318 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 UMPSP11172 480 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 FUT1P19526 365 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 IFNA8P32881 189 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 MS4A2Q01362 244 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 NANOGNBQ7Z5D8 188 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 PXKQ7Z7A4 578 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 MEX3DQ86XN8 651 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 CDC20BQ86Y33 519 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 NRMQ8IXM6 262 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 TMEM123Q8N131 208 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 POMGNT2Q8NAT1 580 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 LIPHQ8WWY8 451 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 SLC7A6OSQ96CW6 309 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 HS3ST6Q96QI5 342 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 OR2M2Q96R28 347 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 NMNAT1Q9HAN9 279 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 NOX1Q9Y5S8 564 aa16.05■□□□□ 0.16
PDLIM7-216ENST00000506537 SPG11Q96JI7 2443 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 A0A087WUU8 490 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 TCRBV5S2A0A599 114 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 SERPINI2O75830 405 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 RHCEP18577 417 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 AHCYP23526 432 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 ZP4Q12836 540 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 STK11Q15831 433 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 GABRA6Q16445 453 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 TBPL2Q6SJ96 375 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 CYP4Z1Q86W10 505 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 ACOT11Q8WXI4 607 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 DHRS1Q96LJ7 313 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 EMC6Q9BV81 110 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 LINC00470Q9BZP3 86 aa16.04■□□□□ 0.16
PDLIM7-216ENST00000506537 ALPK2Q86TB3 2170 aa16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 OTOGQ6ZRI0 2925 aa16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 A0A1W2PRQ8 180 aa16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 OR5H1A6NKK0 313 aa16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 SLC43A1O75387 559 aa16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 H1F0P07305 194 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 TSPAN19P0C672 248 aa16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 IFI30P13284 250 aa16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 MAKP20794 623 aa16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 MPGP29372 298 aa16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 RPL18Q07020 188 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 DGCR6Q14129 220 aa16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 TRIM25Q14258 630 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-216ENST00000506537 PHYHD1Q5SRE7 291 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms