RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CPLX1O14810 134 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 KIAA0754O94854 1291 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 CA1P00915 261 aaPredicted RBP4.35□□□□□ -1.71
HERC4-213ENST00000506515 IGKV3-15P01624 115 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 TDGF1P13385 188 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 PGCP20142 388 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 ADSSP30520 456 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 GDI1P31150 447 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 UGT1A3P35503 534 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 HPCAL1P37235 193 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 STARP49675 285 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 PSMC5P62195 406 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 BCL2L1Q07817 233 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 RIPPLY1Q0D2K3 151 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 CUL1Q13616 776 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 PSMD5Q16401 504 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 TIGITQ495A1 244 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 OR5M10Q6IEU7 315 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 FAHD2BQ6P2I3 314 aaPredicted RBP4.35□□□□□ -1.71
HERC4-213ENST00000506515 IPMKQ8NFU5 416 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 STXBP6Q8NFX7 210 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 FAF2Q96CS3 445 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 FAHD2AQ96GK7 314 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 C12orf66Q96MD2 445 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 CYP2S1Q96SQ9 504 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 EDEM2Q9BV94 578 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 NXF5Q9H1B4 397 aaKnown RBP4.35□□□□□ -1.71
HERC4-213ENST00000506515 APOBEC3BQ9UH17 382 aaKnown RBP4.35□□□□□ -1.71
HERC4-213ENST00000506515 RIMS3Q9UJD0 308 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 MOKQ9UQ07 419 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 PRG3Q9Y2Y8 225 aaPredicted RBP4.35□□□□□ -1.71
HERC4-213ENST00000506515 ASB3Q9Y575 518 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 ACACAQ13085 2346 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 SETXQ7Z333 2677 aaKnown RBP4.35□□□□□ -1.71
HERC4-213ENST00000506515 DOCK5Q9H7D0 1870 aa4.35□□□□□ -1.71
HERC4-213ENST00000506515 H0YCG3 227 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 K7EQM0 130 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 CCL16O15467 120 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 GMFGO60234 142 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 ADCY5O95622 1261 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 CCNE2O96020 404 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 PRG2P13727 222 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 VDAC1P21796 283 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 CCNE1P24864 410 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 OR3A4PP47883 348 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 QARSP47897 775 aaKnown RBP4.34□□□□□ -1.71
HERC4-213ENST00000506515 P2RY4P51582 365 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 IGLV3-21P80748 117 aaPredicted RBP4.34□□□□□ -1.71
HERC4-213ENST00000506515 ITGB3BPQ13352 177 aaPredicted RBP4.34□□□□□ -1.71
HERC4-213ENST00000506515 KIAA0040Q15053 153 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 GGTA1PQ4G0N0 100 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 ZNF589Q86UQ0 364 aaPredicted RBP4.34□□□□□ -1.71
HERC4-213ENST00000506515 SLC38A6Q8IZM9 456 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 SPAG16Q8N0X2 631 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 CCDC148Q8NFR7 591 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 OR51G2Q8NGK0 314 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 PIBF1Q8WXW3 757 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 MS4A14Q96JA4 679 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 SENP8Q96LD8 212 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 ZNF607Q96SK3 696 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 PHLPP2Q6ZVD8 1323 aa4.34□□□□□ -1.71
HERC4-213ENST00000506515 ASH1LQ9NR48 2969 aaKnown RBP4.34□□□□□ -1.72
HERC4-213ENST00000506515 HELZ2Q9BYK8 2649 aaKnown RBP4.33□□□□□ -1.72
HERC4-213ENST00000506515 NAV2Q8IVL1 2488 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 PI4KAP42356 2102 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 PATJQ8NI35 1801 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 LOC100131303A0A0U1RQF7 123 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 A0A1B0GUA9 196 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 K7ENP7 123 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 WWP2O00308 870 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 TNFSF11O14788 317 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 CBX1P83916 185 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 SMARCB1Q12824 385 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 RAB40BQ12829 278 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 SF3A2Q15428 464 aaKnown RBP4.33□□□□□ -1.72
HERC4-213ENST00000506515 SYPL1Q16563 259 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 ANKDD1AQ495B1 522 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 WSCD1Q658N2 575 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 SLC8B1Q6J4K2 584 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 MOB1BQ7L9L4 216 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 C16orf62Q7Z3J2 963 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 ZBTB8OSQ8IWT0 167 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 FBXL16Q8N461 479 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 C15orf54Q8N8G6 183 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 OR5L2Q8NGL0 311 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 ITFG1Q8TB96 612 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 HAVCR1Q96D42 359 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 TRIM44Q96DX7 344 aaPredicted RBP4.33□□□□□ -1.72
HERC4-213ENST00000506515 CELF6Q96J87 481 aaKnown RBP4.33□□□□□ -1.72
HERC4-213ENST00000506515 CEP170P1Q96L14 293 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 CITED1Q99966 193 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 MAPKAP1Q9BPZ7 522 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 C19orf24Q9BVV8 132 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 SLITRK2Q9H156 845 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 VNN3Q9NY84 501 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 AIPL1Q9NZN9 384 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 OR1A1Q9P1Q5 309 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 WRAP73Q9P2S5 460 aaPredicted RBP4.33□□□□□ -1.72
HERC4-213ENST00000506515 RNF14Q9UBS8 474 aa4.33□□□□□ -1.72
HERC4-213ENST00000506515 ZNF221Q9UK13 617 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms