RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TSC22D1Q15714 1073 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 TAB1Q15750 504 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 PXKQ7Z7A4 578 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 NKAIN4Q8IVV8 208 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 KDM8Q8N371 416 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 FAM156AQ8NDB6 213 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 PIK3C3Q8NEB9 887 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 ANKK1Q8NFD2 765 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 SGTBQ96EQ0 304 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 LINC00470Q9BZP3 86 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 MUC13Q9H3R2 512 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 ANKRD19PQ9H560 264 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 FAM32AQ9Y421 112 aaKnown RBP14.71□□□□□ -0.05
SNCA-209ENST00000506244 LRRN3E7EW58 273 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 PDLIM1O00151 329 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 ITGA5P08648 1049 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 ITGA2P17301 1181 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 AHCYP23526 432 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 UGT2B15P54855 530 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 SH3BGRP55822 239 aaPredicted RBP14.7□□□□□ -0.06
SNCA-209ENST00000506244 LTBQ06643 244 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 PPA1Q15181 289 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 GPR137CQ8N3F9 429 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 NINJ1Q92982 152 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 MCUR1Q96AQ8 359 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 ALKBH3Q96Q83 286 aaPredicted RBP14.7□□□□□ -0.06
SNCA-209ENST00000506244 C1orf21Q9H246 121 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 ESRP2Q9H6T0 727 aaKnown RBP14.7□□□□□ -0.06
SNCA-209ENST00000506244 B3GAT2Q9NPZ5 323 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 MEPEQ9NQ76 525 aaPredicted RBP14.7□□□□□ -0.06
SNCA-209ENST00000506244 PRPF19Q9UMS4 504 aaKnown RBP14.7□□□□□ -0.06
SNCA-209ENST00000506244 MAGED1Q9Y5V3 778 aaPredicted RBP14.7□□□□□ -0.06
SNCA-209ENST00000506244 ENPP4Q9Y6X5 453 aa14.7□□□□□ -0.06
SNCA-209ENST00000506244 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.69□□□□□ -0.06
SNCA-209ENST00000506244 MS4A18H0YCH9 400 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 RNF13O43567 381 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 OR7A10O76100 309 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 HPRP00739 348 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 ASAH2BP0C7U1 165 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 ZP4Q12836 540 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 MS4A18Q3C1V0 323 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 MTX3Q5HYI7 312 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 ALKBH2Q6NS38 261 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 HMBOX1Q6NT76 420 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 KLHL24Q6TFL4 600 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 SLC46A3Q7Z3Q1 461 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 HDDC2Q7Z4H3 204 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 PFN4Q8NHR9 129 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 POP5Q969H6 163 aaKnown RBP14.69□□□□□ -0.06
SNCA-209ENST00000506244 ADAD1Q96M93 576 aaKnown RBP14.69□□□□□ -0.06
SNCA-209ENST00000506244 AMDHD2Q9Y303 409 aa14.69□□□□□ -0.06
SNCA-209ENST00000506244 ANKRD17O75179 2603 aaKnown RBP14.69□□□□□ -0.06
SNCA-209ENST00000506244 ZNF726A6NNF4 738 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 SIAH2O43255 324 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 SERPINI2O75830 405 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 ZNF432O94892 652 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 STAMBPO95630 424 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 RHCEP18577 417 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 PAX7P23759 505 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 YAP1P46937 504 aaKnown RBP14.68□□□□□ -0.06
SNCA-209ENST00000506244 GABRA6Q16445 453 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 PAMR1Q6UXH9 720 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 C22orf34Q6ZV56 151 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 RNF113BQ8IZP6 322 aaKnown RBP14.68□□□□□ -0.06
SNCA-209ENST00000506244 TMEM123Q8N131 208 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 LIPHQ8WWY8 451 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 ACOT11Q8WXI4 607 aaPredicted RBP14.68□□□□□ -0.06
SNCA-209ENST00000506244 PLPPR2Q96GM1 343 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 PYURFQ96I23 114 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 MUS81Q96NY9 551 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 OR2M2Q96R28 347 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 KRCC1Q9NPI7 259 aaPredicted RBP14.68□□□□□ -0.06
SNCA-209ENST00000506244 ACTR3BQ9P1U1 418 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 RHCGQ9UBD6 479 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 TEX15Q9BXT5 2789 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 ABCA4P78363 2273 aa14.68□□□□□ -0.06
SNCA-209ENST00000506244 A0A1W2PRG6 482 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 C11orf98E9PRG8 122 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 RPL36A-HNRNPH2H7BZ11 118 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 J3KTA2 159 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 FFAR1O14842 300 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 KLF4O43474 513 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 WNT11O96014 354 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 H1F0P07305 194 aaKnown RBP14.67□□□□□ -0.06
SNCA-209ENST00000506244 IFI30P13284 250 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 FUT1P19526 365 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 SMIM11AP58511 58 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 FOXD4Q12950 439 aaPredicted RBP14.67□□□□□ -0.06
SNCA-209ENST00000506244 DNAL1Q4LDG9 190 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 C9orf135Q5VTT2 229 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 KLHL17Q6TDP4 642 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 ZNF730Q6ZMV8 503 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 RRM2BQ7LG56 351 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 CDK20Q8IZL9 346 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 BPIFA2Q96DR5 249 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 BOD1Q96IK1 185 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 LRR1Q96L50 414 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 NDEL1Q9GZM8 345 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 NMNAT1Q9HAN9 279 aaPredicted RBP14.67□□□□□ -0.06
SNCA-209ENST00000506244 MOV10Q9HCE1 1003 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms