RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 DIRAS3O95661 229 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 MMP9P14780 707 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 SPIBQ01892 262 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 TP53BP2Q13625 1128 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 OXA1LQ15070 435 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 MRPL2Q5T653 305 aaKnown RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 KIRREL2Q6UWL6 708 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 PHC2Q8IXK0 858 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 NLGN4YQ8NFZ3 816 aaPredicted RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 OR4K5Q8NGD3 323 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 OR52R1Q8NGF1 315 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 WFDC12Q8WWY7 111 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 ADGRL4Q9HBW9 690 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 SPASTQ9UBP0 616 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 Q9UFV3 132 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 NDRG2Q9UN36 371 aaKnown RBP5.32□□□□□ -1.56
SCLT1-207ENST00000506233 HEBP2Q9Y5Z4 205 aa5.32□□□□□ -1.56
SCLT1-207ENST00000506233 COL12A1Q99715 3063 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 TACC2O95359 2948 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 FAAHO00519 579 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 NTN3O00634 580 aaPredicted RBP5.31□□□□□ -1.56
SCLT1-207ENST00000506233 ASAH2BP0C7U1 165 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 SLC35E2P0CK97 266 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 NR2F6P10588 404 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 FPR3P25089 353 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 ALDH4A1P30038 563 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 SSR2P43308 183 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 CAMPP49913 170 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 NUP107P57740 925 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 TTC23Q5W5X9 447 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 QSOX2Q6ZRP7 698 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 FAM92BQ6ZTR7 304 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 WDR5BQ86VZ2 330 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 CLDN22Q8N7P3 220 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 BCORP1Q8N888 145 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 BEND2Q8NDZ0 799 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 FAM83FQ8NEG4 500 aaPredicted RBP5.31□□□□□ -1.56
SCLT1-207ENST00000506233 BBS10Q8TAM1 723 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 SLC35G5Q96KT7 338 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 TSC22D3Q99576 134 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 FOLH1BQ9HBA9 442 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 HINT3Q9NQE9 182 aaKnown RBP5.31□□□□□ -1.56
SCLT1-207ENST00000506233 CTPS2Q9NRF8 586 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 ZCCHC3Q9NUD5 404 aaKnown RBP5.31□□□□□ -1.56
SCLT1-207ENST00000506233 HRASLS2Q9NWW9 162 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 CNOT2Q9NZN8 540 aaKnown RBP5.31□□□□□ -1.56
SCLT1-207ENST00000506233 P2RX2Q9UBL9 471 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 BCAP29Q9UHQ4 241 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 ST6GALNAC2Q9UJ37 374 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 C3orf18Q9UK00 162 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 GSAPA4D1B5 854 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 J3QRK9 145 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 ZNF749O43361 778 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 FADS1O60427 444 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 CYP7B1O75881 506 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 BCL10O95999 233 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 ALPPP05187 535 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 ZNF28P17035 718 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 KLK2P20151 261 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 MTNR1AP48039 350 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 CAPZA1P52907 286 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 VSX2P58304 361 aaPredicted RBP5.31□□□□□ -1.56
SCLT1-207ENST00000506233 FABP5Q01469 135 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 ST3GAL4Q11206 333 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 TSPAN31Q12999 210 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 HIST2H2ACQ16777 129 aaPredicted RBP5.31□□□□□ -1.56
SCLT1-207ENST00000506233 DEFB133Q30KQ1 61 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 TBC1D25Q3MII6 688 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 DCDC5Q6ZRR9 648 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 RASSF6Q6ZTQ3 369 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 MOB3CQ70IA8 216 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 ATG4DQ86TL0 474 aaPredicted RBP5.31□□□□□ -1.56
SCLT1-207ENST00000506233 SYT14Q8NB59 555 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 HSD17B8Q92506 261 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 TSLPQ969D9 159 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 WDYHV1Q96HA8 205 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 TXN2Q99757 166 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 ZNF768Q9H5H4 540 aaKnown RBP5.31□□□□□ -1.56
SCLT1-207ENST00000506233 HAO2Q9NYQ3 351 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 SLC7A7Q9UM01 511 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 KLHDC2Q9Y2U9 406 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 SPAG17Q6Q759 2223 aa5.31□□□□□ -1.56
SCLT1-207ENST00000506233 LINC00854A0A1B0GVQ3 168 aa5.3□□□□□ -1.56
SCLT1-207ENST00000506233 A0A1W2PQ72 361 aa5.3□□□□□ -1.56
SCLT1-207ENST00000506233 NSA2O95478 260 aaKnown RBP5.3□□□□□ -1.56
SCLT1-207ENST00000506233 OXSR1O95747 527 aaPredicted RBP5.3□□□□□ -1.56
SCLT1-207ENST00000506233 FADS2O95864 444 aaKnown RBP5.3□□□□□ -1.56
SCLT1-207ENST00000506233 CYC1P08574 325 aa5.3□□□□□ -1.56
SCLT1-207ENST00000506233 CMPK1P30085 196 aa5.3□□□□□ -1.56
SCLT1-207ENST00000506233 BTCP35070 178 aa5.3□□□□□ -1.56
SCLT1-207ENST00000506233 CSNK1EP49674 416 aaKnown RBP5.3□□□□□ -1.56
SCLT1-207ENST00000506233 PNLIPRP2P54317 469 aa5.3□□□□□ -1.56
SCLT1-207ENST00000506233 SCN1BQ07699 218 aa5.3□□□□□ -1.56
SCLT1-207ENST00000506233 TRIM40Q6P9F5 258 aa5.3□□□□□ -1.56
SCLT1-207ENST00000506233 TMEM108Q6UXF1 575 aa5.3□□□□□ -1.56
SCLT1-207ENST00000506233 C16orf47Q6ZP98 133 aaPredicted RBP5.3□□□□□ -1.56
SCLT1-207ENST00000506233 PRSS42Q7Z5A4 293 aa5.3□□□□□ -1.56
SCLT1-207ENST00000506233 NPEPL1Q8NDH3 523 aa5.3□□□□□ -1.56
SCLT1-207ENST00000506233 CDC26Q8NHZ8 85 aa5.3□□□□□ -1.56
SCLT1-207ENST00000506233 VANGL1Q8TAA9 524 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms