RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 MALRD1Q5VYJ5 2156 aa4.26□□□□□ -1.73
CDH9-203ENST00000505045 TRBV5-3A0A0A0MS03 114 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 CFAP73A6NFT4 308 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 ZNF724A8MTY0 619 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 UBDO15205 165 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 SOX30O94993 753 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 AKR7A3O95154 331 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 LY6G6DO95868 133 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 CD8AP01732 235 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 IL6P05231 212 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 PABPC4LP0CB38 370 aaKnown RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 PPP3CBP16298 524 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 IL7RP16871 459 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 FPR1P21462 350 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 HTR2AP28223 471 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 APOBEC1P41238 236 aaKnown RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 SLC1A3P43003 542 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 SLC16A1P53985 500 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 CSNK2A1P68400 391 aaPredicted RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 EGR4Q05215 589 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 TOP3AQ13472 1001 aaPredicted RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 RGNQ15493 299 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 GSTA3Q16772 222 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 RNF220Q5VTB9 566 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 ATG16L1Q676U5 607 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 CASP12Q6UXS9 341 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 LINGO2Q7L985 606 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 GALNT5Q7Z7M9 940 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 CROCCP2Q86T23 111 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 MTDHQ86UE4 582 aaKnown RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 WDFY1Q8IWB7 410 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 KIRREL3Q8IZU9 778 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 MIER2Q8N344 545 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 CADM2Q8N3J6 435 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 TRIML2Q8N7C3 387 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 ZNF433Q8N7K0 673 aaPredicted RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 TMEM99Q8N816 258 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 ZNF611Q8N823 705 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 ZIC4Q8N9L1 334 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 GLB1L3Q8NCI6 653 aaPredicted RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 STEAP2Q8NFT2 490 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 OR52N5Q8NH56 324 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 OR52P1PQ8NH57 321 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 HTRA1Q92743 480 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 C3orf49Q96BT1 292 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 ATP6V1G3Q96LB4 118 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 C7orf26Q96N11 449 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 ALKBH3Q96Q83 286 aaPredicted RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 ZBTB18Q99592 522 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 PIP5K1AQ99755 562 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 PTDSS2Q9BVG9 487 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 TRIM2Q9C040 744 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 FAM107BQ9H098 131 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 OR10A4Q9H209 315 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 SMURF1Q9HCE7 757 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 HHATLQ9HCP6 504 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 TCF7L2Q9NQB0 619 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 SLC7A10Q9NS82 523 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 CCDC167Q9P0B6 97 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 TMEM181Q9P2C4 612 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 LIPT1Q9Y234 373 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.25□□□□□ -1.73
CDH9-203ENST00000505045 IGKV1D-42A0A075B6H8 117 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 FAM234BA2RU67 622 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 LIPT2A6NK58 231 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 OR5H1A6NKK0 313 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 FTCDNL1E5RQL4 147 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 SLCO1B7G3V0H7 640 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 CLIC1O00299 241 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 FAAHO00519 579 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 ABCD4O14678 606 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 TPST1O60507 370 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 NPIPB7O75200 414 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 ANP32DO95626 131 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 MPIG6BO95866 241 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 IGHV4-39P01824 125 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 DBIP07108 87 aaKnown RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 ZCCHC18P0CG32 403 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 AQP1P29972 269 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 MRPL19P49406 292 aaKnown RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 POLR2HP52434 150 aaKnown RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 CRISP3P54108 245 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 GYS2P54840 703 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 AQP5P55064 265 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 OR2B6P58173 313 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 LTBQ06643 244 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 FAPQ12884 760 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 CEACAM7Q14002 265 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 SELPLGQ14242 412 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 SLC17A1Q14916 467 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 P2RY6Q15077 328 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 PPA1Q15181 289 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 OR7A5Q15622 319 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 ADRM1Q16186 407 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 ZNF672Q499Z4 452 aaPredicted RBP4.25□□□□□ -1.73
CDH9-203ENST00000505045 LIN52Q52LA3 116 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 LRIF1Q5T3J3 769 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 TSPO2Q5TGU0 170 aa4.25□□□□□ -1.73
CDH9-203ENST00000505045 AGBL2Q5U5Z8 902 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms