RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PCBP3P57721 371 aaKnown RBP12.89□□□□□ -0.35
TCOF1-207ENST00000504761 RIN1Q13671 783 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 NTRK2Q16620 822 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 OR8H1Q8NGG4 311 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 ACOT12Q8WYK0 555 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 OR14A2Q96R54 314 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 MED29Q9NX70 200 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 EIF3KQ9UBQ5 218 aaKnown RBP12.89□□□□□ -0.35
TCOF1-207ENST00000504761 ING1Q9UK53 422 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-207ENST00000504761 EXO1Q9UQ84 846 aaKnown RBP12.89□□□□□ -0.35
TCOF1-207ENST00000504761 CORINQ9Y5Q5 1042 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 SLC2A1P11166 492 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 ABCD3P28288 659 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 UBE2NP61088 152 aaKnown RBP12.89□□□□□ -0.35
TCOF1-207ENST00000504761 RPL18Q07020 188 aaKnown RBP12.89□□□□□ -0.35
TCOF1-207ENST00000504761 OCLNQ16625 522 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 PLK5Q496M5 336 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 CBLN3Q6UW01 205 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 OR1N1Q8NGS0 311 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 C15orf40Q8WUR7 153 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 HOXB13Q92826 284 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-207ENST00000504761 TMEM106AQ96A25 262 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 CACNG6Q9BXT2 260 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 HHLA2Q9UM44 414 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 CAMK2AQ9UQM7 478 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 COA3Q9Y2R0 106 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-207ENST00000504761 THSD7BQ9C0I4 1608 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 VWA8A3KMH1 1905 aa12.89□□□□□ -0.35
TCOF1-207ENST00000504761 METTL15A6NJ78 407 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 A6NLC8 198 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 BOLA2-SMG1P6H3BVE0 249 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 GABARAPO95166 117 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 CD3GP09693 182 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 LINC00271P0C7V0 271 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 BCAP31P51572 246 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 ACKR1Q16570 336 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 AWAT2Q6E213 333 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 LAX1Q8IWV1 398 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 SLC7A11Q9UPY5 501 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 ANKRD61A6NGH8 418 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 ARGFXA6NJG6 315 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 STK17BO94768 372 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 MPIG6BO95866 241 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 GABRA5P31644 462 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 ZFP36L2P47974 494 aaKnown RBP12.88□□□□□ -0.35
TCOF1-207ENST00000504761 ARPC4P59998 168 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 SIGLEC14Q08ET2 396 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 AAED1Q7RTV5 226 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 TBC1D15Q8TC07 691 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 RADILQ96JH8 1075 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 CMC2Q9NRP2 79 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 KLK4Q9Y5K2 254 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 MRPL33O75394 65 aaKnown RBP12.88□□□□□ -0.35
TCOF1-207ENST00000504761 SNRPBP14678 240 aaKnown RBP12.88□□□□□ -0.35
TCOF1-207ENST00000504761 PITPNBP48739 271 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 RAB15P59190 212 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 H1FNTQ75WM6 255 aaPredicted RBP12.88□□□□□ -0.35
TCOF1-207ENST00000504761 ZAR1Q86SH2 424 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 TRIM63Q969Q1 353 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 TSPAN10Q9H1Z9 355 aaPredicted RBP12.88□□□□□ -0.35
TCOF1-207ENST00000504761 INPP5EQ9NRR6 644 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 NUFIP1Q9UHK0 495 aaKnown RBP12.88□□□□□ -0.35
TCOF1-207ENST00000504761 TEX51A0A1B0GUA7 166 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 IGHEP01854 428 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 RBM34P42696 430 aaKnown RBP12.88□□□□□ -0.35
TCOF1-207ENST00000504761 CBX5P45973 191 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 CARD18P57730 90 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 PRTGQ2VWP7 1150 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 ATAD3CQ5T2N8 411 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF704Q6ZNC4 412 aaPredicted RBP12.88□□□□□ -0.35
TCOF1-207ENST00000504761 NDUFAF7Q7L592 441 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 PARP16Q8N5Y8 322 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 OR5T2Q8NGG2 359 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 OR4D11Q8NGI4 311 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 OCIAD1Q9NX40 245 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 OSGIN1Q9UJX0 560 aa12.88□□□□□ -0.35
TCOF1-207ENST00000504761 GGT3PA6NGU5 568 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 CTSBP07858 339 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 PNLIPRP2P54317 469 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 RPL22L1Q6P5R6 122 aaKnown RBP12.87□□□□□ -0.35
TCOF1-207ENST00000504761 PHC2Q8IXK0 858 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 ABHD4Q8TB40 342 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 MMP28Q9H239 520 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 CALHM2Q9HA72 323 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF346Q9UL40 294 aaKnown RBP12.87□□□□□ -0.35
TCOF1-207ENST00000504761 TBC1D24Q9ULP9 559 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 EMC9Q9Y3B6 208 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 NOP16Q9Y3C1 178 aaKnown RBP12.87□□□□□ -0.35
TCOF1-207ENST00000504761 V9GY05 133 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 FRG2CA6NGY1 282 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 LRRTM2O43300 516 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 TOXO94900 526 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 BMP4P12644 408 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 TBRG1Q3YBR2 411 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 ABCA11PQ4W5N1 156 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 TMEM201Q5SNT2 666 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 XKRXQ6PP77 449 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 TMEM17Q86X19 198 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF584Q8IVC4 421 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 ANKRD9Q96BM1 317 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms