RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 DNAH7Q8WXX0 4024 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 C3orf84H3BNL1 204 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 GPR37O15354 613 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 AKAP10O43572 662 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 XPNPEP2O43895 674 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 GPIP06744 558 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 RBP1P09455 135 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 OR8G3PP0DMU2 310 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 FRKP42685 505 aaPredicted RBP10.51□□□□□ -0.73
LSM6-204ENST00000504181 PTDSS1P48651 473 aaKnown RBP10.51□□□□□ -0.73
LSM6-204ENST00000504181 SLC3A1Q07837 685 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 TP53BP2Q13625 1128 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 ZNF141Q15928 474 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 IMPG1Q17R60 797 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 GPRIN3Q6ZVF9 776 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 EIF3MQ7L2H7 374 aaKnown RBP10.51□□□□□ -0.73
LSM6-204ENST00000504181 EPHX4Q8IUS5 362 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 CCDC36Q8IYA8 594 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 ZSCAN4Q8NAM6 433 aaPredicted RBP10.51□□□□□ -0.73
LSM6-204ENST00000504181 SYNPRQ8TBG9 265 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 SSMEM1Q8WWF3 244 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 PMM1Q92871 262 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 FAM71F1Q96KD3 344 aaPredicted RBP10.51□□□□□ -0.73
LSM6-204ENST00000504181 DCLRE1CQ96SD1 692 aaKnown RBP10.51□□□□□ -0.73
LSM6-204ENST00000504181 SDF2Q99470 211 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 DCAF16Q9NXF7 216 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 SH3BP4Q9P0V3 963 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 NPTNQ9Y639 398 aa10.51□□□□□ -0.73
LSM6-204ENST00000504181 IGLV3-9A0A075B6K5 115 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 HMX2A2RU54 273 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 LIPT2A6NK58 231 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 A8MT66 165 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 ZNF208O43345 1280 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 SLC43A1O75387 559 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 UGT2B17O75795 530 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 UBOX5O94941 541 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 TGDSO95455 350 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 IGHV2-70P01814 119 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 CHRM4P08173 479 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 PGM1P36871 562 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 IDH2P48735 452 aaKnown RBP10.5□□□□□ -0.73
LSM6-204ENST00000504181 P2RY4P51582 365 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 CLDN17P56750 224 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 ERVS71-1P61550 626 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 GUCY2DQ02846 1103 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 NRN1LQ496H8 165 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 ESCO2Q56NI9 601 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 EMBQ6PCB8 327 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 BTNL3Q6UXE8 466 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 Q6ZTK2 550 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 CYS1Q717R9 158 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 GPR137CQ8N3F9 429 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 KLHL36Q8N4N3 616 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 POU5F2Q8N7G0 328 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 C11orf44Q8N8P7 122 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 FAM71CQ8NEG0 241 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 OR5D16Q8NGK9 328 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 TBC1D15Q8TC07 691 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 PPCDCQ96CD2 204 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 OR7D2Q96RA2 312 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 ZNF382Q96SR6 550 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 C16orf95Q9H693 158 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 ADPRHL2Q9NX46 363 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 SLCO1C1Q9NYB5 712 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 OSGIN1Q9UJX0 560 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 MKLN1Q9UL63 735 aa10.5□□□□□ -0.73
LSM6-204ENST00000504181 FAF1Q9UNN5 650 aaPredicted RBP10.5□□□□□ -0.73
LSM6-204ENST00000504181 SLC22A23A1A5C7 686 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 ZNF99A8MXY4 864 aaPredicted RBP10.49□□□□□ -0.73
LSM6-204ENST00000504181 FCMRO60667 390 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 SCN2BO60939 215 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 SUPT7LO94864 414 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 RAB36O95755 333 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 IGHV4-59P01825 116 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 UROSP10746 265 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 LSP1P33241 339 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 SERPINB8P50452 374 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 POLR2HP52434 150 aaKnown RBP10.49□□□□□ -0.73
LSM6-204ENST00000504181 HERPUD1Q15011 391 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 LARS2Q15031 903 aaKnown RBP10.49□□□□□ -0.73
LSM6-204ENST00000504181 MAPK14Q16539 360 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 LRRN1Q6UXK5 716 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 SPICQ8N5J4 248 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 ICA1LQ8NDH6 482 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 ACTRT1Q8TDG2 376 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 NEURL3Q96EH8 262 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 OCSTAMPQ9BR26 566 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 C1QTNF3Q9BXJ4 246 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 IL20RAQ9UHF4 553 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 TRIM33Q9UPN9 1127 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 STAB2Q8WWQ8 2551 aa10.49□□□□□ -0.73
LSM6-204ENST00000504181 ZNF816-ZNF321PA0A0X1KG74 233 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 F5H0A9 414 aaPredicted RBP10.48□□□□□ -0.73
LSM6-204ENST00000504181 AP3D1O14617 1153 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 SPRY3O43610 288 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 ZNF500O60304 480 aaPredicted RBP10.48□□□□□ -0.73
LSM6-204ENST00000504181 IGHV1-46P01743 117 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 LCKP06239 509 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 SFTPBP07988 381 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 ZNF250P15622 560 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms