RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 HIST3H2AQ7L7L0 130 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 NANOGNBQ7Z5D8 188 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 GPAT4Q86UL3 456 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 MEX3DQ86XN8 651 aaKnown RBP8.93□□□□□ -0.98
NUP54-203ENST00000504173 GCNT2Q8N0V5 402 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 SCAIQ8N9R8 606 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 NAXEQ8NCW5 288 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 OR4C15Q8NGM1 316 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 OR5J2Q8NH18 312 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 STMN2Q93045 179 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 HIST1H2ACQ93077 130 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 GMPPAQ96IJ6 420 aaPredicted RBP8.93□□□□□ -0.98
NUP54-203ENST00000504173 FAM46AQ96IP4 442 aaKnown RBP8.93□□□□□ -0.98
NUP54-203ENST00000504173 PSD2Q9BQI7 771 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 GLRX2Q9NS18 164 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 MRPL39Q9NYK5 338 aaKnown RBP8.93□□□□□ -0.98
NUP54-203ENST00000504173 COQ3Q9NZJ6 369 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 SEC14L4Q9UDX3 406 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 Q9UFV3 132 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 ZNF229Q9UJW7 825 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 CLEC4AQ9UMR7 237 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 B3GALT5Q9Y2C3 310 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 DOCK7Q96N67 2140 aa8.93□□□□□ -0.98
NUP54-203ENST00000504173 PRRC2AP48634 2157 aaKnown RBP8.93□□□□□ -0.98
NUP54-203ENST00000504173 RRP9O43818 475 aaKnown RBP8.92□□□□□ -0.98
NUP54-203ENST00000504173 SS18L1O75177 396 aaPredicted RBP8.92□□□□□ -0.98
NUP54-203ENST00000504173 VAMP5O95183 116 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 ASAH2BP0C7U1 165 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 ADORA3P0DMS8 318 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 MAKP20794 623 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 AHCYP23526 432 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 CTSSP25774 331 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 DNAJA1P31689 397 aaKnown RBP8.92□□□□□ -0.98
NUP54-203ENST00000504173 OMPP47874 163 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 LIMS1P48059 325 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 SLC9A3P48764 834 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 P2RY4P51582 365 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 IST1P53990 364 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 SIRPAP78324 504 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 TLE4Q04727 773 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 C1DQ13901 141 aaKnown RBP8.92□□□□□ -0.98
NUP54-203ENST00000504173 LAPTM4AQ15012 233 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 TMEM201Q5SNT2 666 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 BIVMQ86UB2 503 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 CCDC71Q8IV32 467 aaPredicted RBP8.92□□□□□ -0.98
NUP54-203ENST00000504173 TUSC5Q8IXB3 177 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 KDM8Q8N371 416 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 LINC00471Q8N535 108 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 LRRC17Q8N6Y2 441 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 CNEP1R1Q8N9A8 125 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 ADPRHL1Q8NDY3 354 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 OR10G2Q8NGC3 310 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 OR9Q2Q8NGE9 314 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 ASB5Q8WWX0 329 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 LRTOMTQ8WZ04 291 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 SDCCAG3Q96C92 435 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 FOXC2Q99958 501 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 TACO1Q9BSH4 297 aaKnown RBP8.92□□□□□ -0.98
NUP54-203ENST00000504173 BDH2Q9BUT1 245 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 SF3B5Q9BWJ5 86 aaKnown RBP8.92□□□□□ -0.98
NUP54-203ENST00000504173 SFXN3Q9BWM7 321 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 GP6Q9HCN6 339 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 S100A14Q9HCY8 104 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 EMC3Q9P0I2 261 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 RNF6Q9Y252 685 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 RASD1Q9Y272 281 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 EMC9Q9Y3B6 208 aa8.92□□□□□ -0.98
NUP54-203ENST00000504173 A0A1W2PNV4 684 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 ZNF716A6NP11 495 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 ZNF724A8MTY0 619 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 C11orf98E9PRG8 122 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 BLOC1S5-TXNDC5H3BN57 136 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 H3BNX3 289 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 PLPP3O14495 311 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 GPR171O14626 319 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 DVL2O14641 736 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 CRHP06850 196 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 YES1P07947 543 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 ZNF43P17038 809 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 BMP5P22003 454 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 AGTR1P30556 359 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 CHRNB4P30926 498 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 OPRM1P35372 400 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 ARHGDIAP52565 204 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 SLC16A1P53985 500 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 PUDPQ08623 228 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 FOXF2Q12947 444 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 SLC17A1Q14916 467 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 PDK3Q15120 406 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 GUSBP1Q15486 140 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 MICAQ29983 383 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 PGBD2Q6P3X8 592 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 TMPRSS11FQ6ZWK6 438 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 FAM214BQ7L5A3 538 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 AMIGO2Q86SJ2 522 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 OAFQ86UD1 273 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 MED12LQ86YW9 2145 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 AQP11Q8NBQ7 271 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 ACBD4Q8NC06 268 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 OR9K2Q8NGE7 335 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms