RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 OR5M11Q96RB7 305 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 SNX18Q96RF0 628 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 LYSMD1Q96S90 227 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 OSGIN1Q9UJX0 560 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 ETV7Q9Y603 341 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 A0A0D9SG52 128 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 TRDV1A0A1B0GX56 115 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 LILRB5O75023 590 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 VEGFCP49767 419 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 IDH3GP51553 393 aaPredicted RBP15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 ZNF77Q15935 545 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 TMEM64Q6YI46 380 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 RFPL4BQ6ZWI9 263 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 PRICKLE2Q7Z3G6 844 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 TM7SF3Q9NS93 570 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 ABCA3Q99758 1704 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 A8MXE2 369 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 EIF1BO60739 113 aaKnown RBP15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 HOXB5P09067 269 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 IL2RGP31785 369 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 LAMB2P55268 1798 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 ZFPM2Q8WW38 1151 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 RAB3CQ96E17 227 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 SIAEQ9HAT2 523 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 RPS10P5Q9NQ39 176 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 PCDHGA1Q9Y5H4 931 aa15.29■□□□□ 0.04
PCDHA1-203ENST00000504120 BCORQ6W2J9 1755 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 A0A1B0GVG6 124 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 GPLD1P80108 840 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 PAPD4Q6PIY7 484 aaKnown RBP15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 FCRL1Q96LA6 429 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 SLC6A18Q96N87 628 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 OR14A2Q96R54 314 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 PPA2Q9H2U2 334 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 SDHAF2Q9NX18 166 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 LRIT2A6NDA9 550 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 RNF212BA8MTL3 300 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 GFYI3L273 518 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 BMP1P13497 986 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 TRIM23P36406 574 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 CASP3P42574 277 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 LIM2P55344 173 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 ALKBH1Q13686 389 aaKnown RBP15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 TMEM31Q5JXX7 168 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 IDO2Q6ZQW0 420 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 TMEM184BQ9Y519 407 aaPredicted RBP15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 MFAP5Q13361 173 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 NPSR1Q6W5P4 371 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 SLC16A11Q8NCK7 471 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 EDAQ92838 391 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 BORCS7Q96B45 105 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 UTP23Q9BRU9 249 aaKnown RBP15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 NMNAT2Q9BZQ4 307 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 DHCR7Q9UBM7 475 aaKnown RBP15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 RREB1Q92766 1687 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 RPS18P62269 152 aaKnown RBP15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 MLF2Q15773 248 aaPredicted RBP15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 ESPNLQ6ZVH7 1005 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 GPR155Q7Z3F1 870 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 PAQR8Q8TEZ7 354 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 TCTEX1D2Q8WW35 142 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 UBQLN3Q9H347 655 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 METTL17Q9H7H0 456 aaPredicted RBP15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 BIN3Q9NQY0 253 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 PPT2Q9UMR5 302 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 A3GALT2U3KPV4 340 aa15.28■□□□□ 0.04
PCDHA1-203ENST00000504120 PRAMEF27A3QJZ7 478 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 A8MVM7 634 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 SSTR2P30874 369 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 PIGAP37287 484 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 CD79BP40259 229 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 BIDP55957 195 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 CLDN12P56749 244 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 RRAS2P62070 204 aaPredicted RBP15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 RACK1P63244 317 aaKnown RBP15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 ZNF750Q32MQ0 723 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 PRAMEF20Q5VT98 475 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 PRAMEF9Q5VWM5 478 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 SMIM3Q9BZL3 60 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 LIN7BQ9HAP6 207 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 LUZP4Q9P127 313 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 MRPS28Q9Y2Q9 187 aaKnown RBP15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 A0A1B0GTW7 788 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 DPP4P27487 766 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 SORDQ00796 357 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 GRAMD2AQ8IUY3 354 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 OR13H1Q8NG92 308 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 MSI2Q96DH6 328 aaKnown RBP15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 MCOLN1Q9GZU1 580 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 RANGRFQ9HD47 186 aaPredicted RBP15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 MUTYHQ9UIF7 546 aa15.27■□□□□ 0.04
PCDHA1-203ENST00000504120 OR2A25A4D2G3 310 aa15.27■□□□□ 0.03
PCDHA1-203ENST00000504120 SHOXO15266 292 aa15.27■□□□□ 0.03
PCDHA1-203ENST00000504120 OR7C1O76099 320 aaPredicted RBP15.27■□□□□ 0.03
PCDHA1-203ENST00000504120 SLC34A2O95436 690 aa15.27■□□□□ 0.03
PCDHA1-203ENST00000504120 IGLV3-25P01717 112 aa15.27■□□□□ 0.03
PCDHA1-203ENST00000504120 DPTQ07507 201 aa15.27■□□□□ 0.03
PCDHA1-203ENST00000504120 SLC9A3R2Q15599 337 aa15.27■□□□□ 0.03
PCDHA1-203ENST00000504120 STEAP3Q658P3 488 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms