RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 ALDOCP09972 364 aaKnown RBP13.83□□□□□ -0.2
MUC1-220ENST00000498431 TCN1P20061 433 aaPredicted RBP13.83□□□□□ -0.2
MUC1-220ENST00000498431 COL8A2P25067 703 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 RPS5P46782 204 aaKnown RBP13.83□□□□□ -0.2
MUC1-220ENST00000498431 CLNS1AP54105 237 aaKnown RBP13.83□□□□□ -0.2
MUC1-220ENST00000498431 WDR4P57081 412 aaKnown RBP13.83□□□□□ -0.2
MUC1-220ENST00000498431 UFM1P61960 85 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 ACTG1P63261 375 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 EGR4Q05215 589 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 DPY19L1Q2PZI1 675 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 ATG16L1Q676U5 607 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 THSD4Q6ZMP0 1018 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 ZNF621Q6ZSS3 439 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 SERPINA11Q86U17 422 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 PEX5LQ8IYB4 626 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 ZFAND2BQ8WV99 257 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 MS4A3Q96HJ5 214 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 MOV10Q9HCE1 1003 aaKnown RBP13.83□□□□□ -0.2
MUC1-220ENST00000498431 SLC6A13Q9NSD5 602 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 RCE1Q9Y256 329 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 ZNF443Q9Y2A4 671 aaPredicted RBP13.83□□□□□ -0.2
MUC1-220ENST00000498431 SPEF1Q9Y4P9 236 aa13.83□□□□□ -0.2
MUC1-220ENST00000498431 VSTM5A8MXK1 200 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 AHSA1O95433 338 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 HPXP02790 462 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 ZNF43P17038 809 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 NCF2P19878 526 aaPredicted RBP13.82□□□□□ -0.2
MUC1-220ENST00000498431 PCMT1P22061 227 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 ARR3P36575 388 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 CAPZA2P47755 286 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 COMPP49747 757 aaPredicted RBP13.82□□□□□ -0.2
MUC1-220ENST00000498431 MVDP53602 400 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 ABCE1P61221 599 aaKnown RBP13.82□□□□□ -0.2
MUC1-220ENST00000498431 COPZ1P61923 177 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 HOXC5Q00444 222 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 CHI3L2Q15782 390 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 LIN52Q52LA3 116 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 RPS26P11Q5JNZ5 115 aaPredicted RBP13.82□□□□□ -0.2
MUC1-220ENST00000498431 PHYHD1Q5SRE7 291 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 UGT2A3Q6UWM9 527 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 LRP11Q86VZ4 500 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 TRIML2Q8N7C3 387 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 ANKK1Q8NFD2 765 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 MFSD8Q8NHS3 518 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 STK35Q8TDR2 534 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 MRPL24Q96A35 216 aaKnown RBP13.82□□□□□ -0.2
MUC1-220ENST00000498431 TMEM186Q96B77 213 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 KTI12Q96EK9 354 aaPredicted RBP13.82□□□□□ -0.2
MUC1-220ENST00000498431 SORT1Q99523 831 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 NUF2Q9BZD4 464 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 RACGAP1Q9H0H5 632 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 B3GNT2Q9NY97 397 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 CMAHPQ9Y471 501 aa13.82□□□□□ -0.2
MUC1-220ENST00000498431 SYNGR3O43761 229 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 SLC43A1O75387 559 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 HLA-HP01893 362 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 SERPINE1P05121 402 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 BCHEP06276 602 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 ETFAP13804 333 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 LBPP18428 481 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 NR4A1P22736 598 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 ALDH3B1P43353 468 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 GPR6P46095 362 aaPredicted RBP13.81□□□□□ -0.2
MUC1-220ENST00000498431 ANXA11P50995 505 aaKnown RBP13.81□□□□□ -0.2
MUC1-220ENST00000498431 SEC24CP53992 1094 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 TXNL4AP83876 142 aaKnown RBP13.81□□□□□ -0.2
MUC1-220ENST00000498431 POU3F1Q03052 451 aaPredicted RBP13.81□□□□□ -0.2
MUC1-220ENST00000498431 MAD2L1BPQ15013 274 aaPredicted RBP13.81□□□□□ -0.2
MUC1-220ENST00000498431 C1orf229Q6ZS94 237 aaPredicted RBP13.81□□□□□ -0.2
MUC1-220ENST00000498431 LRRC34Q8IZ02 419 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 TMEM123Q8N131 208 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 GPR137CQ8N3F9 429 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 YIPF5Q969M3 257 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 OR2M2Q96R28 347 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 OR52E6Q96RD3 313 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 SYT3Q9BQG1 590 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 TREM2Q9NZC2 230 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 MYEF2Q9P2K5 600 aaKnown RBP13.81□□□□□ -0.2
MUC1-220ENST00000498431 REV1Q9UBZ9 1251 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 RAP2CQ9Y3L5 183 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 TRRAPQ9Y4A5 3859 aa13.81□□□□□ -0.2
MUC1-220ENST00000498431 A0A096LPI6 279 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 TMEM89A2RUT3 159 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 M0R233 179 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 NCR1O76036 304 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 MSMBP08118 114 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 SAGP10523 405 aaPredicted RBP13.8□□□□□ -0.2
MUC1-220ENST00000498431 RPL14P50914 215 aaKnown RBP13.8□□□□□ -0.2
MUC1-220ENST00000498431 RNF220Q5VTB9 566 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 WDFY1Q8IWB7 410 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 C3orf56Q8N813 242 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 IL17RDQ8NFM7 739 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 SLC38A5Q8WUX1 472 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 GCDHQ92947 438 aaPredicted RBP13.8□□□□□ -0.2
MUC1-220ENST00000498431 ZNF75AQ96N20 296 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 OXGR1Q96P68 337 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 LRRC37BQ96QE4 947 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 INTS9Q9NV88 658 aaKnown RBP13.8□□□□□ -0.2
MUC1-220ENST00000498431 AIG1Q9NVV5 245 aa13.8□□□□□ -0.2
MUC1-220ENST00000498431 P2RX2Q9UBL9 471 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms