RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 ZNF587Q96SQ5 575 aaPredicted RBP12.73□□□□□ -0.37
VPS26A-209ENST00000497564 ACKR4Q9NPB9 350 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 CHST11Q9NPF2 352 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 CLN6Q9NWW5 311 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 TAS2R5Q9NYW4 299 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 KLHL21Q9UJP4 597 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 B3GALT5Q9Y2C3 310 aa12.73□□□□□ -0.37
VPS26A-209ENST00000497564 A0A1W2PNV4 684 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 NPIPB13A6NJU9 1138 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 KDM4EB2RXH2 506 aaPredicted RBP12.72□□□□□ -0.37
VPS26A-209ENST00000497564 NPIPB4C9JG80 1138 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 M0R129 80 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 TLX2O43763 284 aaPredicted RBP12.72□□□□□ -0.37
VPS26A-209ENST00000497564 TRAPPC6AO75865 159 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 IFNGP01579 166 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 IGHMP01871 453 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 GTF2E2P29084 291 aaKnown RBP12.72□□□□□ -0.37
VPS26A-209ENST00000497564 FMO3P31513 532 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 RPL4P36578 427 aaKnown RBP12.72□□□□□ -0.37
VPS26A-209ENST00000497564 MAGEA5P43359 124 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 SLC35A1P78382 337 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 PMS2P3Q13401 168 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 APOFQ13790 326 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 ESPL1Q14674 2120 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 OR7A5Q15622 319 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 TMEM176BQ3YBM2 270 aaPredicted RBP12.72□□□□□ -0.37
VPS26A-209ENST00000497564 GXYLT1Q4G148 440 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 EMC4Q5J8M3 183 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 WIPI1Q5MNZ9 446 aaPredicted RBP12.72□□□□□ -0.37
VPS26A-209ENST00000497564 H1FNTQ75WM6 255 aaPredicted RBP12.72□□□□□ -0.37
VPS26A-209ENST00000497564 FAM122BQ7Z309 247 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 FAM109AQ8N4B1 249 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 PLEKHA8Q96JA3 519 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 KLHL15Q96M94 604 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 SFXN2Q96NB2 322 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 ERMAPQ96PL5 475 aaPredicted RBP12.72□□□□□ -0.37
VPS26A-209ENST00000497564 OR5B2Q96R09 309 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 IL4I1Q96RQ9 567 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 KATNB1Q9BVA0 655 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 DUSP21Q9H596 190 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 TMEM185BQ9H7F4 350 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 ZDHHC11Q9H8X9 412 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 ASF1BQ9NVP2 202 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 SCN3BQ9NY72 215 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 AASSQ9UDR5 926 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 TPRKBQ9Y3C4 175 aa12.72□□□□□ -0.37
VPS26A-209ENST00000497564 ALPK2Q86TB3 2170 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 TRIM64CA6NLI5 447 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 RIIAD1A6NNX1 92 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 MRPS14O60783 128 aaKnown RBP12.71□□□□□ -0.37
VPS26A-209ENST00000497564 SMIM18P0DKX4 95 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 ADORA3P0DMS8 318 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 GNLYP22749 145 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 SFTPDP35247 375 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 DIO1P49895 249 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 CTXN1P60606 82 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 PPIAP62937 165 aaKnown RBP12.71□□□□□ -0.37
VPS26A-209ENST00000497564 SLC35A2P78381 396 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 PUDPQ08623 228 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 SMN1Q16637 294 aaKnown RBP12.71□□□□□ -0.37
VPS26A-209ENST00000497564 ZNF362Q5T0B9 420 aaPredicted RBP12.71□□□□□ -0.37
VPS26A-209ENST00000497564 GPR139Q6DWJ6 353 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 GGNQ86UU5 652 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 BPIFB6Q8NFQ5 453 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 IPCEF1Q8WWN9 437 aaPredicted RBP12.71□□□□□ -0.37
VPS26A-209ENST00000497564 INIPQ9NRY2 104 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 FKBP14Q9NWM8 211 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 SEC14L4Q9UDX3 406 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 SCOCQ9UIL1 159 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 IER3IP1Q9Y5U9 82 aa12.71□□□□□ -0.37
VPS26A-209ENST00000497564 A0A0J9YW62 118 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 LOC102725191A0A1B0GVB3 256 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 A0A1W2PNR3 127 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 FAM166BA8MTA8 275 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 MS4A18H0YCH9 400 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 M0R3G1 203 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 SULT2B1O00204 365 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 PRODHO43272 600 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 SEC14L5O43304 696 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 XPNPEP2O43895 674 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 EIF1BO60739 113 aaKnown RBP12.7□□□□□ -0.38
VPS26A-209ENST00000497564 FAM20BO75063 409 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 ENTPD6O75354 484 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 OR6A2O95222 327 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 ZNF3P17036 446 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 SDHAP31040 664 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 RFC3P40938 356 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 SLC15A1P46059 708 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 P2RY4P51582 365 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 OR2B6P58173 313 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 ERVK-25P63136 954 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 TUBA4AP68366 448 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 CSNK2A1P68400 391 aaPredicted RBP12.7□□□□□ -0.38
VPS26A-209ENST00000497564 H3F3AP84243 136 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 MRPL49Q13405 166 aaKnown RBP12.7□□□□□ -0.38
VPS26A-209ENST00000497564 ZNF169Q14929 603 aaPredicted RBP12.7□□□□□ -0.38
VPS26A-209ENST00000497564 SLC10A1Q14973 349 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 BCL2A1Q16548 175 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 MS4A18Q3C1V0 323 aa12.7□□□□□ -0.38
VPS26A-209ENST00000497564 AADACL4Q5VUY2 407 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms