RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 HLA-DOBP13765 273 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 GABRA1P14867 456 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 RPL4P36578 427 aaKnown RBP16.3■□□□□ 0.2
RGP1-202ENST00000496906 CDK5Q00535 292 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 SLC17A1Q14916 467 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 POU4F3Q15319 338 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 GPAT4Q86UL3 456 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 IQCF1Q8N6M8 205 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 ANKK1Q8NFD2 765 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 OR2T33Q8NG76 320 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 OR4Q3Q8NH05 313 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 ABHD3Q8WU67 409 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 ZNF570Q96NI8 536 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 TACO1Q9BSH4 297 aaKnown RBP16.3■□□□□ 0.2
RGP1-202ENST00000496906 ADI1Q9BV57 179 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 KATNB1Q9BVA0 655 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 IFT27Q9BW83 186 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 SF3B5Q9BWJ5 86 aaKnown RBP16.3■□□□□ 0.2
RGP1-202ENST00000496906 SLC25A19Q9HC21 320 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 NRIP3Q9NQ35 241 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 FAM118AQ9NWS6 357 aa16.3■□□□□ 0.2
RGP1-202ENST00000496906 SHANK1Q9Y566 2161 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 SLC22A20A6NK97 555 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 FIGNL2A6NMB9 653 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 ZNF716A6NP11 495 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 SLC19A2O60779 497 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 TGM6O95932 706 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 PLGP00747 810 aaPredicted RBP16.29■□□□□ 0.2
RGP1-202ENST00000496906 CD14P08571 375 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 PTGER4P35408 488 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 GIPRP48546 466 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 CTXN1P60606 82 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 POU3F1Q03052 451 aaPredicted RBP16.29■□□□□ 0.2
RGP1-202ENST00000496906 RBPJQ06330 500 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 GINS1Q14691 196 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 TMEM236Q5W0B7 351 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 SLC27A4Q6P1M0 643 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 NHLRC1Q6VVB1 395 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 TRIB1Q96RU8 372 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 POLDIP3Q9BY77 421 aaKnown RBP16.29■□□□□ 0.2
RGP1-202ENST00000496906 PRRG4Q9BZD6 226 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 ADAM18Q9Y3Q7 739 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 NOX1Q9Y5S8 564 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 GTF3C1Q12789 2109 aa16.29■□□□□ 0.2
RGP1-202ENST00000496906 NPIPB13A6NJU9 1138 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 NPIPB4C9JG80 1138 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 PRRG2O14669 202 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 SLC16A6O15403 523 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 TRAF3IP2O43734 574 aaPredicted RBP16.28■□□□□ 0.2
RGP1-202ENST00000496906 SERPINI2O75830 405 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 PPP1R3DO95685 299 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 IGHMP01871 453 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 FCGR2AP12318 317 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 SLC16A1P53985 500 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 ERVK-25P63136 954 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 RASGEF1BQ0VAM2 473 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 SF3B4Q15427 424 aaKnown RBP eCLIP16.28■□□□□ 0.2
RGP1-202ENST00000496906 PGGHGQ32M88 737 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 SLX4IPQ5VYV7 408 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 FAM122BQ7Z309 247 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 UEVLDQ8IX04 471 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 LNX2Q8N448 690 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 DHRSXQ8N5I4 330 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 OR9K2Q8NGE7 335 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 HRASLS5Q96KN8 279 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 ZNF184Q99676 751 aaPredicted RBP16.28■□□□□ 0.2
RGP1-202ENST00000496906 PITX2Q99697 317 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 CALHM2Q9HA72 323 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 ING1Q9UK53 422 aaPredicted RBP16.28■□□□□ 0.2
RGP1-202ENST00000496906 NDRG4Q9ULP0 352 aaKnown RBP16.28■□□□□ 0.2
RGP1-202ENST00000496906 CHD6Q8TD26 2715 aa16.28■□□□□ 0.2
RGP1-202ENST00000496906 LOC100130705A0A1B0GUX0 176 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 A0A1W2PRG6 482 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 CD8B2A6NJW9 211 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 ARPC3O15145 178 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 APEHP13798 732 aaKnown RBP16.27■□□□□ 0.2
RGP1-202ENST00000496906 ZNF43P17038 809 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 HSPA13P48723 471 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 SMSP52788 366 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 ADARB1P78563 741 aaKnown RBP16.27■□□□□ 0.2
RGP1-202ENST00000496906 PDK3Q15120 406 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 ACKR1Q16570 336 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 SOWAHCQ53LP3 525 aaPredicted RBP16.27■□□□□ 0.2
RGP1-202ENST00000496906 NSUN5P2Q63ZY6 315 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 RTL6Q6ICC9 239 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 ACSM5Q6NUN0 579 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 ZNF555Q8NEP9 628 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 CYGBQ8WWM9 190 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 TFAP2CQ92754 450 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 TSPAN32Q96QS1 320 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 TXNIPQ9H3M7 391 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 RNF122Q9H9V4 155 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 KLHL9Q9P2J3 617 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 BAIAP2Q9UQB8 552 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 FAM215AQ9Y5M1 114 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 IER3IP1Q9Y5U9 82 aa16.27■□□□□ 0.2
RGP1-202ENST00000496906 IGKV3D-15A0A087WSY6 115 aa16.26■□□□□ 0.19
RGP1-202ENST00000496906 H0YAE9 185 aa16.26■□□□□ 0.19
RGP1-202ENST00000496906 HOXD4P09016 255 aaPredicted RBP16.26■□□□□ 0.19
RGP1-202ENST00000496906 IFNGR1P15260 489 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms