RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 CCT3P49368 545 aaKnown RBP3.81□□□□□ -1.8
SF3B1-212ENST00000496458 C21orf59P57076 290 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 MERTKQ12866 999 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 TPSAB1Q15661 275 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 HNRNPA1L2Q32P51 320 aaKnown RBP3.81□□□□□ -1.8
SF3B1-212ENST00000496458 LINC01620Q4KN68 170 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 XKR7Q5GH72 579 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 PAGE2BQ5JRK9 111 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 DEGS2Q6QHC5 323 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 WASH2PQ6VEQ5 465 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 SYCE1Q8N0S2 351 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 TRIML2Q8N7C3 387 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 M1APQ8TC57 530 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 FNDC8Q8TC99 324 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 LKAAEAR1Q8TD35 194 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 PAQR8Q8TEZ7 354 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 ZNF285Q96NJ3 590 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 RPRD1AQ96P16 312 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-212ENST00000496458 APOOQ9BUR5 198 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 HCAR1Q9BXC0 346 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 RGCCQ9H4X1 137 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 SMOXQ9NWM0 555 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 RPS6KB2Q9UBS0 482 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 ZNF639Q9UID6 485 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 TMCO1Q9UM00 188 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 KLHDC2Q9Y2U9 406 aa3.81□□□□□ -1.8
SF3B1-212ENST00000496458 BLMP54132 1417 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 FLT4P35916 1363 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 MYO3BQ8WXR4 1341 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 A0A0J9YVX5 310 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 GOLGA6L4A6NEF3 574 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 C9JVG2 144 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 PSMD11O00231 422 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 POLR1CO15160 346 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 TIMM8AO60220 97 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 SNAI1O95863 264 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 TGM6O95932 706 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 RPSAP08865 295 aaKnown RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 CYP2B6P20813 491 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 FDFT1P37268 417 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 NAMPTP43490 491 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 RPS5P46782 204 aaKnown RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 RAG2P55895 527 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 ARPC4P59998 168 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 XIAPP98170 497 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 ENPEPQ07075 957 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 IFFO1Q0D2I5 559 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 EXOSC2Q13868 293 aaKnown RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 SYPL1Q16563 259 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 AANATQ16613 207 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 GLYR1Q49A26 553 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 DMKNQ6E0U4 476 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 GOLGA7Q7Z5G4 137 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 TSEN54Q7Z6J9 526 aaKnown RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 TPRA1Q86W33 373 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 GTPBP8Q8N3Z3 284 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 OR4F17Q8NGA8 305 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 CLHC1Q8NHS4 586 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 TMEM37Q8WXS4 190 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 KIAA1143Q96AT1 154 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 SGK3Q96BR1 496 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 OR4F4Q96R69 305 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 SDHCQ99643 169 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 SPATA16Q9BXB7 569 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 GSDMCQ9BYG8 508 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 ANKRD60Q9BZ19 345 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 POLR3FQ9H1D9 316 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 LPAR2Q9HBW0 351 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 TMEM165Q9HC07 324 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 ZNF160Q9HCG1 818 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 CHRAC1Q9NRG0 131 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 NUDT15Q9NV35 164 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 IL20Q9NYY1 176 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 GGA2Q9UJY4 613 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 PAIP2BQ9ULR5 123 aaKnown RBP3.8□□□□□ -1.8
SF3B1-212ENST00000496458 PYCARDQ9ULZ3 195 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 WDR45Q9Y484 360 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 PEAK1Q9H792 1746 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 ANKRD26Q9UPS8 1709 aa3.8□□□□□ -1.8
SF3B1-212ENST00000496458 RTL1A6NKG5 1358 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 PPIAL4CA0A0B4J2A2 164 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-212ENST00000496458 RRP8O43159 456 aaKnown RBP3.79□□□□□ -1.8
SF3B1-212ENST00000496458 CHMP2AO43633 222 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 SCGNO76038 276 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 ANP32DO95626 131 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 TSPAN12O95859 305 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 ECDO95905 644 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-212ENST00000496458 PGK1P00558 417 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 APOA1P02647 267 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 OPN1LWP04000 364 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 HSPB1P04792 205 aaKnown RBP3.79□□□□□ -1.8
SF3B1-212ENST00000496458 PLEKP08567 350 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-212ENST00000496458 CLTAP09496 248 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 ANXA4P09525 319 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-212ENST00000496458 HOXB7P09629 217 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 CCDC166P0CW27 439 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 PPIAL4GP0DN37 164 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 TUBG1P23258 451 aa3.79□□□□□ -1.8
SF3B1-212ENST00000496458 CYLC1P35663 651 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms