RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SMYD1Q8NB12 490 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 MAGEE2Q8TD90 523 aaPredicted RBP12.44□□□□□ -0.42
VTI1A-209ENST00000496445 ZNF837Q96EG3 531 aaPredicted RBP12.44□□□□□ -0.42
VTI1A-209ENST00000496445 SLC41A3Q96GZ6 507 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 ADAD1Q96M93 576 aaKnown RBP12.44□□□□□ -0.42
VTI1A-209ENST00000496445 ANKRD27Q96NW4 1050 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 OXGR1Q96P68 337 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 ZNF607Q96SK3 696 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 CGREF1Q99674 301 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 RABEP2Q9H5N1 569 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 FKRPQ9H9S5 495 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 NPHS2Q9NP85 383 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 CRNNQ9UBG3 495 aaPredicted RBP12.44□□□□□ -0.42
VTI1A-209ENST00000496445 ADAM21Q9UKJ8 722 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 ATRQ13535 2644 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 ZNF503-AS2A6NEH8 195 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 KIAA1324LA8MWY0 1029 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-209ENST00000496445 LRRN3E7EW58 273 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 MS4A18H0YCH9 400 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 SLC43A1O75387 559 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 CECR9P0C854 216 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 HLA-DOBP13765 273 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 CDH12P55289 794 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 SH3BGRP55822 239 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-209ENST00000496445 MST1LQ2TV78 715 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 MS4A18Q3C1V0 323 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 PHYHD1Q5SRE7 291 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 HMBOX1Q6NT76 420 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 H1FNTQ75WM6 255 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-209ENST00000496445 NET1Q7Z628 596 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-209ENST00000496445 ZNF525Q8N782 197 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 C11orf65Q8NCR3 313 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 BHLHE22Q8NFJ8 381 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-209ENST00000496445 GPR32P1Q8NGA4 272 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 OR10H5Q8NGA6 315 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 OR6S1Q8NH40 331 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 SLC47A1Q96FL8 570 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 MOGAT1Q96PD6 335 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 OR2M2Q96R28 347 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 ARHGDIGQ99819 225 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 GPR35Q9HC97 309 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 NDUFAF1Q9Y375 327 aa12.43□□□□□ -0.42
VTI1A-209ENST00000496445 LOC102725191A0A1B0GVB3 256 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 ANGPT2O15123 496 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 SERPINB7O75635 380 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 IGKV3-15P01624 115 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 IGLV1-44P01699 117 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 THY1P04216 161 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 CELA3BP08861 270 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 CALCRP30988 508 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 APOBEC3AP31941 199 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-209ENST00000496445 UBE2NP61088 152 aaKnown RBP12.42□□□□□ -0.42
VTI1A-209ENST00000496445 ARF1P84077 181 aaKnown RBP12.42□□□□□ -0.42
VTI1A-209ENST00000496445 NAAAQ02083 359 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 RBBP4Q09028 425 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 DUSP7Q16829 419 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 CYP51A1Q16850 503 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 SWI5Q1ZZU3 235 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 ANKRD16Q6P6B7 361 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 NHLRC1Q6VVB1 395 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 WDR88Q6ZMY6 472 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 RANBP3LQ86VV4 465 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-209ENST00000496445 TSPYL5Q86VY4 417 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-209ENST00000496445 ANKK1Q8NFD2 765 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 OR4D11Q8NGI4 311 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 ZNF317Q96PQ6 595 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-209ENST00000496445 KATNB1Q9BVA0 655 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 KAT8Q9H7Z6 458 aaKnown RBP12.42□□□□□ -0.42
VTI1A-209ENST00000496445 TMEM27Q9HBJ8 222 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 CRLF2Q9HC73 371 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 ANK2Q01484 3957 aa12.42□□□□□ -0.42
VTI1A-209ENST00000496445 A0A0G2JND7 137 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 COL6A5A8TX70 2615 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 M0QX08 132 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 FBP2O00757 339 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 CD5LO43866 347 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 GPRIN2O60269 458 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 FMO6PO60774 539 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 CRLF1O75462 422 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 SEC14L2O76054 403 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 LY6HO94772 140 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 LYPD3O95274 346 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 CD247P20963 164 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 PCGF2P35227 344 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 GZMMP51124 257 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 CRYBA2P53672 197 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 IL1RL1Q01638 556 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 C1DQ13901 141 aaKnown RBP12.41□□□□□ -0.42
VTI1A-209ENST00000496445 NFYCQ13952 458 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 RAB35Q15286 201 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 CEACAM16Q2WEN9 425 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 C3orf36Q3SXR2 165 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 SWT1Q5T5J6 900 aaKnown RBP12.41□□□□□ -0.42
VTI1A-209ENST00000496445 CLEC2AQ6UVW9 174 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 LINC00114Q6XXX2 140 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 RBM45Q8IUH3 476 aaKnown RBP12.41□□□□□ -0.42
VTI1A-209ENST00000496445 UEVLDQ8IX04 471 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 SCAIQ8N9R8 606 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 OR6T1Q8NGN1 323 aa12.41□□□□□ -0.42
VTI1A-209ENST00000496445 RNF217Q8TC41 542 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms