RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 UNKLQ9H9P5 680 aaKnown RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 NEUROD4Q9HD90 331 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 HINT3Q9NQE9 182 aaKnown RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 MTCL1Q9Y4B5 1905 aaKnown RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 NINQ8N4C6 2090 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 CDHR4A6H8M9 788 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 BTBD17A6NE02 478 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 IDSB3KWA1 339 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 RNASEK-C17orf49H0YIS7 233 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 ETHE1O95571 254 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 F12P00748 615 aaPredicted RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 CD5P06127 495 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 RNH1P13489 461 aaKnown RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 CPT2P23786 658 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 GABRR2P28476 465 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 OMPP47874 163 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 PPP2CBP62714 309 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 PPP2CAP67775 309 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 HGFACQ04756 655 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 ZNF234Q14588 700 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 DHCR24Q15392 516 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 C4orf46Q504U0 113 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 ZNF311Q5JNZ3 666 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 PLEKHS1Q5SXH7 462 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 TPGS2Q68CL5 300 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 NIPAL3Q6P499 406 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 FAM151BQ6UXP7 276 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 C11orf96Q7Z7L8 435 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 CPOQ8IVL8 374 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 TCEAL8Q8IYN2 117 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 NXPE1Q8N323 547 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 BOLLQ8N9W6 283 aaKnown RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 OR2G2Q8NGZ5 317 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 BBS10Q8TAM1 723 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 PAQR8Q8TEZ7 354 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 NUDCD2Q8WVJ2 157 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 LCN9Q8WX39 176 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 WNT2BQ93097 391 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 PIK3IP1Q96FE7 263 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 MEGF10Q96KG7 1140 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 S100A13Q99584 98 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 CDCA3Q99618 268 aaPredicted RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 SLC25A21Q9BQT8 299 aaPredicted RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 TRMT61BQ9BVS5 477 aaKnown RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 RSPO3Q9BXY4 272 aaPredicted RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 SEMA6CQ9H3T2 930 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 RHOFQ9HBH0 211 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 BCL2L10Q9HD36 194 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 C19orf12Q9NSK7 152 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 P2RX2Q9UBL9 471 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 ATXN7L1Q9ULK2 861 aaPredicted RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 KCNIP3Q9Y2W7 256 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 FAM221BA6H8Z2 402 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 IFITM5A6NNB3 132 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 ZNF705EA8MWA4 302 aaPredicted RBP8.32□□□□□ -1.08
HPS4-217ENST00000496385 MKRN2OSH3BPM6 223 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 SULT2B1O00204 365 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 ADAM10O14672 748 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 MBTPS2O43462 519 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 CTNSO60931 367 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 IGLV3-27P01718 113 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 CD14P08571 375 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 AKAIN1P0CW23 69 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 IL9P15248 144 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 C5AR1P21730 350 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 ACKR3P25106 362 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 PPP2R1BP30154 601 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 F2RL1P55085 397 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 SRSF3P84103 164 aaKnown RBP8.32□□□□□ -1.08
HPS4-217ENST00000496385 ST3GAL3Q11203 375 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 MAMDC2Q7Z304 686 aaPredicted RBP8.32□□□□□ -1.08
HPS4-217ENST00000496385 THOC6Q86W42 341 aaKnown RBP8.32□□□□□ -1.08
HPS4-217ENST00000496385 PMM1Q92871 262 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 MIB2Q96AX9 1013 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 SMIM14Q96QK8 99 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 OR5B2Q96R09 309 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 SPSB2Q99619 263 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 ORAI3Q9BRQ5 295 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 PIAS3Q9Y6X2 628 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 TBC1D3DA0A087WVF3 549 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 TBC1D3IA0A087WXS9 549 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 TBC1D3EA0A087X179 549 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 TBC1D3KA0A087X1G2 549 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 GXYLT2A0PJZ3 443 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 TBC1D3FA6NER0 549 aaPredicted RBP8.32□□□□□ -1.08
HPS4-217ENST00000496385 TBC1D3LB9A6J9 549 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 PSMD9O00233 223 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 SOCS6O14544 535 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 GPRIN2O60269 458 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 F10P00742 488 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 ITGB2P05107 769 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 SFTA3P0C7M3 94 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 NDUFV2P19404 249 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 TBXA2RP21731 343 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 AVPR2P30518 371 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 CCR2P41597 374 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 PGFP49763 221 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 TAS2R20P59543 309 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 POU4F2Q12837 409 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 AIMP2Q13155 320 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms