RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 RPS14P62263 151 aaKnown RBP2.75□□□□□ -1.97
CLK1-214ENST00000496205 RAD51Q06609 339 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 SERTAD2Q14140 314 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 VAMP3Q15836 100 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 NDUFA9Q16795 377 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 HSDL1Q3SXM5 330 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 TP53I3Q53FA7 332 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 ATAD3CQ5T2N8 411 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 C9orf135Q5VTT2 229 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 STUMQ69YW2 141 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 SLC25A25Q6KCM7 469 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 DEGS2Q6QHC5 323 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 C6orf89Q6UWU4 347 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 CXCL17Q6UXB2 119 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 PAMR1Q6UXH9 720 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 CERS6Q6ZMG9 384 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 VRK2Q86Y07 508 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 CDC20BQ86Y33 519 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 ERO1BQ86YB8 467 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 MMAAQ8IVH4 418 aaKnown RBP2.75□□□□□ -1.97
CLK1-214ENST00000496205 PROKR2Q8NFJ6 384 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 OR4F6Q8NGB9 312 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 OR4A4PQ8NGN8 299 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 OR9G4Q8NGQ1 327 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 OR1L6Q8NGR2 347 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 CD300LFQ8TDQ1 290 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 PIBF1Q8WXW3 757 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 KIAA1143Q96AT1 154 aaPredicted RBP2.75□□□□□ -1.97
CLK1-214ENST00000496205 CERS2Q96G23 380 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 TIMD4Q96H15 378 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 OPALINQ96PE5 141 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 ELOVL4Q9GZR5 314 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 OR52A5Q9H2C5 316 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 FBXO44Q9H4M3 255 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 ZNF385DQ9H6B1 395 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 C8orf33Q9H7E9 229 aaPredicted RBP2.75□□□□□ -1.97
CLK1-214ENST00000496205 SYNDIG1Q9H7V2 258 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 POPDC2Q9HBU9 364 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 CCNB1IP1Q9NPC3 277 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 GPATCH2LQ9NWQ4 482 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 ZNF107Q9UII5 783 aaPredicted RBP2.75□□□□□ -1.97
CLK1-214ENST00000496205 COPS3Q9UNS2 423 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 SAR1BQ9Y6B6 198 aa2.75□□□□□ -1.97
CLK1-214ENST00000496205 A0A1W2PPV9 198 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 PDZK1P1A8MUH7 402 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 E7ESA3 106 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 SIRPB1O00241 398 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 DYNC1I1O14576 645 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 BCKDKO14874 412 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 GPAA1O43292 621 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 CXCL13O43927 109 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 HUS1O60921 280 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 ATP5LO75964 103 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 CLTAP09496 248 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 H2AFZP0C0S5 128 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 MYL2P10916 166 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 ZNF43P17038 809 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 COX5AP20674 150 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 CCNOP22674 350 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 VHLP40337 213 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 OPRD1P41143 372 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 CX3CR1P49238 355 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 HLCSP50747 726 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 SLC25A1P53007 311 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 CDK16Q00536 496 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 PPIL2Q13356 520 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 ASAH1Q13510 395 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 ITIH4Q14624 930 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 GNMTQ14749 295 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 ZNF829Q3KNS6 432 aaPredicted RBP2.74□□□□□ -1.97
CLK1-214ENST00000496205 SLC22A10Q63ZE4 541 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 LRRC31Q6UY01 552 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 ZNF677Q86XU0 584 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 KIR3DL3Q8N743 410 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 C8orf31Q8N9H6 132 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 ASCC1Q8N9N2 400 aaKnown RBP2.74□□□□□ -1.97
CLK1-214ENST00000496205 RHOXF1Q8NHV9 184 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 NDNFQ8TB73 568 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 MRAPQ8TCY5 172 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 TCTEX1D2Q8WW35 142 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 ASZ1Q8WWH4 475 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 HTR3CQ8WXA8 447 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 ANP32BQ92688 251 aaKnown RBP2.74□□□□□ -1.97
CLK1-214ENST00000496205 TOP1MTQ969P6 601 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 ZNF707Q96C28 371 aaPredicted RBP2.74□□□□□ -1.97
CLK1-214ENST00000496205 PLEKHA8Q96JA3 519 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 C12orf42Q96LP6 360 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 ZNF641Q96N77 438 aaPredicted RBP2.74□□□□□ -1.97
CLK1-214ENST00000496205 TRNT1Q96Q11 434 aaKnown RBP2.74□□□□□ -1.97
CLK1-214ENST00000496205 OR5B2Q96R09 309 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 MBOAT4Q96T53 435 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 MCHR1Q99705 422 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 RNF126Q9BV68 326 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 TEKT3Q9BXF9 490 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 TM6SF2Q9BZW4 377 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 RACGAP1Q9H0H5 632 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 RHBGQ9H310 441 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 SPACA1Q9HBV2 294 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 TMEM165Q9HC07 324 aa2.74□□□□□ -1.97
CLK1-214ENST00000496205 TREM1Q9NP99 234 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms