RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 FOLR1P15328 257 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 ATF1P18846 271 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 GRPRP30550 384 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 MMP15P51511 669 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 PNLIPRP2P54317 469 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 CFHR1Q03591 330 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 LTBQ06643 244 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 CBFBQ13951 182 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 GPR176Q14439 515 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 CEP78Q5JTW2 689 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 PRAMEF17Q5VTA0 474 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 TIGD3Q6B0B8 471 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 LYPD4Q6UWN0 246 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 PRSS42Q7Z5A4 293 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 GLCCI1Q86VQ1 547 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 SPEM1Q8N4L4 309 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 Q8N9G6 341 aaPredicted RBP10.07□□□□□ -0.8
CMSS1-208ENST00000496116 EXD3Q8N9H8 876 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 RPS4Y2Q8TD47 263 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 ADAD1Q96M93 576 aaKnown RBP10.07□□□□□ -0.8
CMSS1-208ENST00000496116 ABHD1Q96SE0 405 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 MNTQ99583 582 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 SMAD5Q99717 465 aaKnown RBP10.07□□□□□ -0.8
CMSS1-208ENST00000496116 NRSN2Q9GZP1 204 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 MKL2Q9ULH7 1088 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 AK6Q9Y3D8 172 aaKnown RBP10.07□□□□□ -0.8
CMSS1-208ENST00000496116 CACNG2Q9Y698 323 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 TP53BP1Q12888 1972 aaPredicted RBP10.07□□□□□ -0.8
CMSS1-208ENST00000496116 ABCA7Q8IZY2 2146 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 TRAV36DV7A0A075B6V5 113 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 TMEM72A0PK05 275 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 ITGA10O75578 1167 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 GP1BBP13224 206 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 SNRPBP14678 240 aaKnown RBP10.06□□□□□ -0.8
CMSS1-208ENST00000496116 MAPK3P27361 379 aaPredicted RBP10.06□□□□□ -0.8
CMSS1-208ENST00000496116 CD83Q01151 205 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 IFITM2Q01629 132 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 SF3B4Q15427 424 aaKnown RBP eCLIP10.06□□□□□ -0.8
CMSS1-208ENST00000496116 MESTQ5EB52 335 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 UBE2NLQ5JXB2 153 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 WDR45BQ5MNZ6 344 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 WDR74Q6RFH5 385 aaPredicted RBP10.06□□□□□ -0.8
CMSS1-208ENST00000496116 KRT74Q7RTS7 529 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 MARCH3Q86UD3 253 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 NOXA1Q86UR1 476 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 PRSS58Q8IYP2 241 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 TCTE3Q8IZS6 198 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 TOMM5Q8N4H5 51 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 DTX3Q8N9I9 347 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 ZNF511Q8NB15 262 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 OR5H6Q8NGV6 325 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 DNASE2BQ8WZ79 361 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 TAAR8Q969N4 342 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 OMA1Q96E52 524 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 TSSK2Q96PF2 358 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 TSPAN32Q96QS1 320 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 CCDC86Q9H6F5 360 aaKnown RBP10.06□□□□□ -0.8
CMSS1-208ENST00000496116 SRA1Q9HD15 236 aaKnown RBP10.06□□□□□ -0.8
CMSS1-208ENST00000496116 NOX4Q9NPH5 578 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 ING3Q9NXR8 418 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 WNT16Q9UBV4 365 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 LAMP5Q9UJQ1 280 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 TMEM265A0A087WTH1 108 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 A0A1B0GVC2 190 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 A6NIN4 97 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 PSMD9O00233 223 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 AGRPO00253 132 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 PHYHO14832 338 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 GMFGO60234 142 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 MT-ATP6P00846 226 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 ARSBP15848 533 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 PRKCAP17252 672 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 ABCD3P28288 659 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 CSF2RBP32927 897 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 BTG1P62324 171 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 ZNF684Q5T5D7 378 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 C1orf189Q5VU69 101 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 MAMDC2Q7Z304 686 aaPredicted RBP10.06□□□□□ -0.8
CMSS1-208ENST00000496116 SYT9Q86SS6 491 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 TIGD4Q8IY51 512 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 YIPF7Q8N8F6 280 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 ADAMTS14Q8WXS8 1223 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 FYTTD1Q96QD9 318 aaKnown RBP10.06□□□□□ -0.8
CMSS1-208ENST00000496116 MRI1Q9BV20 369 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 SLC7A5P2Q9GIP4 190 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 VN1R1Q9GZP7 353 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 SLITRK2Q9H156 845 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 FGF21Q9NSA1 209 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 CLEC4AQ9UMR7 237 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 CAMK2AQ9UQM7 478 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 TMEM14AQ9Y6G1 99 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 SEC16AO15027 2179 aa10.06□□□□□ -0.8
CMSS1-208ENST00000496116 HSPB2A8KAH6 182 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 XKRYO14609 159 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 LANCL1O43813 399 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 ZFPL1O95159 310 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 TFPIP10646 304 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 BCKDHBP21953 392 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 P2RX1P51575 399 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 RAB25P57735 213 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms