RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 UGT2B10P36537 528 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 MAGEA2P43356 314 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 FOXG1P55316 489 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-212ENST00000495497 POU3F1Q03052 451 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-212ENST00000495497 LGALS3BPQ08380 585 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 FAM98BQ52LJ0 330 aaKnown RBP17.18■□□□□ 0.34
HDAC4-212ENST00000495497 TSPO2Q5TGU0 170 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 NHLRC1Q6VVB1 395 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 STAC2Q6ZMT1 411 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 NANOGNBQ7Z5D8 188 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 KIF18BQ86Y91 864 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 WDFY1Q8IWB7 410 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 AQP12AQ8IXF9 295 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 RNF113BQ8IZP6 322 aaKnown RBP17.18■□□□□ 0.34
HDAC4-212ENST00000495497 GABRG1Q8N1C3 465 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 CANT1Q8WVQ1 401 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 TXNDC15Q96J42 360 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 ZNF347Q96SE7 839 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 FUZQ9BT04 418 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 MAGIXQ9H6Y5 334 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 PARPBPQ9NWS1 579 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 MED29Q9NX70 200 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 AURKCQ9UQB9 309 aa17.18■□□□□ 0.34
HDAC4-212ENST00000495497 LOC102725191A0A1B0GVB3 256 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 C16orf97H3BN30 126 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 RNF13O43567 381 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 AQP2P41181 271 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 KIR2DL3P43628 341 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 GPR4P46093 362 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 ZP4Q12836 540 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 PPP1R8Q12972 351 aaKnown RBP17.17■□□□□ 0.34
HDAC4-212ENST00000495497 LAPTM4AQ15012 233 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 FBXW9Q5XUX1 488 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 Q6ZT83 130 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 C22orf34Q6ZV56 151 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 RRM2BQ7LG56 351 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 MOSPD2Q8NHP6 518 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 UTP4Q969X6 686 aaKnown RBP17.17■□□□□ 0.34
HDAC4-212ENST00000495497 FAM46AQ96IP4 442 aaKnown RBP17.17■□□□□ 0.34
HDAC4-212ENST00000495497 EMC6Q9BV81 110 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 SLC7A10Q9NS82 523 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 CRIM1Q9NZV1 1036 aa17.17■□□□□ 0.34
HDAC4-212ENST00000495497 DHRS12A0PJE2 317 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 TUBAL3A6NHL2 446 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 EFCAB9A8MZ26 197 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 LYZL6O75951 148 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 RAP2AP10114 183 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 IGHV1-2P23083 117 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 SORDQ00796 357 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 RPL18Q07020 188 aaKnown RBP17.16■□□□□ 0.34
HDAC4-212ENST00000495497 FAPQ12884 760 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 PXKQ7Z7A4 578 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 OR4K5Q8NGD3 323 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 LIPHQ8WWY8 451 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 MARVELD3Q96A59 401 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 ALPK1Q96QP1 1244 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 CHID1Q9BWS9 393 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 MMADHCQ9H3L0 296 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-212ENST00000495497 UPB1Q9UBR1 384 aa17.16■□□□□ 0.34
HDAC4-212ENST00000495497 TRAV27A0A087WT01 109 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 TCRBV3S1A0A5B6 114 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 SH3PXD2BA1X283 911 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 CDC42EP2O14613 210 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 UPK3AO75631 287 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 F13BP05160 661 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 SAGP10523 405 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-212ENST00000495497 SMIM11AP58511 58 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 MELKQ14680 651 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 SFRP5Q5T4F7 317 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 C9orf135Q5VTT2 229 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 CARD17Q5XLA6 110 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 CDK20Q8IZL9 346 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 OR13C2Q8NGS9 318 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 OR51A7Q8NH64 312 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 WFIKKN1Q96NZ8 548 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 TNFRSF13CQ96RJ3 184 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 FANCFQ9NPI8 374 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 VNN3Q9NY84 501 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 NOX1Q9Y5S8 564 aa17.15■□□□□ 0.34
HDAC4-212ENST00000495497 SLC35F4A4IF30 521 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 TNFRSF11BO00300 401 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 HNRNPRO43390 633 aaKnown RBP17.14■□□□□ 0.33
HDAC4-212ENST00000495497 ZNF432O94892 652 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 TSPAN19P0C672 248 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 IFNGR1P15260 489 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 OMPP47874 163 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 LIMS1P48059 325 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 ITGADQ13349 1161 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 FHL1Q13642 323 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 SLC35D2Q76EJ3 337 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 LINGO2Q7L985 606 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 ZNF295-AS1Q8N0V1 137 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 ANKK1Q8NFD2 765 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 POP5Q969H6 163 aaKnown RBP17.14■□□□□ 0.33
HDAC4-212ENST00000495497 SLCO4A1Q96BD0 722 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 ZC3HAV1LQ96H79 300 aaKnown RBP17.14■□□□□ 0.33
HDAC4-212ENST00000495497 OR2M2Q96R28 347 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 GPA33Q99795 319 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 SLCO5A1Q9H2Y9 848 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 TMCC3Q9ULS5 477 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms