RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 DEFB115Q30KQ5 88 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 GPRC6AQ5T6X5 926 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 WDR74Q6RFH5 385 aaPredicted RBP3.08□□□□□ -1.92
SMC4-224ENST00000494612 FAM151AQ8WW52 585 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 EMG1Q92979 244 aaKnown RBP3.08□□□□□ -1.92
SMC4-224ENST00000494612 TIMD4Q96H15 378 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 CCNL2Q96S94 520 aaPredicted RBP3.08□□□□□ -1.92
SMC4-224ENST00000494612 TSG101Q99816 390 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 ZNF670Q9BS34 389 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 NIPSNAP3BQ9BS92 247 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 SMYD3Q9H7B4 428 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 PIPOXQ9P0Z9 390 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 KDM6AO15550 1401 aaPredicted RBP3.08□□□□□ -1.92
SMC4-224ENST00000494612 THSD7BQ9C0I4 1608 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 DLEC1Q9Y238 1755 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 A6NIZ1 184 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 DCTN6O00399 190 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 RHOBTB1O94844 696 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 DIRAS1O95057 198 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 STAMBPO95630 424 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 LGI1O95970 557 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 HSMCR30P0CW71 290 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 PKNOX1P55347 436 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 RIPPLY3P57055 190 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 RAP1BP61224 184 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 GNB2P62879 340 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 TLE4Q04727 773 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 ARL6IP1Q15041 203 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 BCL7AQ4VC05 210 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 BEND3Q5T5X7 828 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 UQCC3Q6UW78 93 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 ZNF571Q7Z3V5 609 aaPredicted RBP3.07□□□□□ -1.92
SMC4-224ENST00000494612 PPP1R42Q7Z4L9 355 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 KRTAP11-1Q8IUC1 163 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 CCDC50Q8IVM0 306 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 FTMTQ8N4E7 242 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 OR4K14Q8NGD5 310 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 CHCHD10Q8WYQ3 142 aaPredicted RBP3.07□□□□□ -1.92
SMC4-224ENST00000494612 OR1E3Q8WZA6 343 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 MRPS31Q92665 395 aaKnown RBP3.07□□□□□ -1.92
SMC4-224ENST00000494612 FRAT1Q92837 279 aaPredicted RBP3.07□□□□□ -1.92
SMC4-224ENST00000494612 RBM14Q96PK6 669 aaKnown RBP3.07□□□□□ -1.92
SMC4-224ENST00000494612 SLC38A2Q96QD8 506 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 ARHGDIGQ99819 225 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 TUBGCP2Q9BSJ2 902 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 RBKSQ9H477 322 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 RNF167Q9H6Y7 350 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 NAP1L2Q9ULW6 460 aaPredicted RBP3.07□□□□□ -1.92
SMC4-224ENST00000494612 PRPF19Q9UMS4 504 aaKnown RBP3.07□□□□□ -1.92
SMC4-224ENST00000494612 RASD1Q9Y272 281 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 POLDIP2Q9Y2S7 368 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 USP42Q9H9J4 1324 aaKnown RBP3.07□□□□□ -1.92
SMC4-224ENST00000494612 INSRP06213 1382 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 FLT4P35916 1363 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 ZNF831Q5JPB2 1677 aa3.07□□□□□ -1.92
SMC4-224ENST00000494612 DICER1Q9UPY3 1922 aaKnown RBP3.07□□□□□ -1.92
SMC4-224ENST00000494612 TNRC18O15417 2968 aaPredicted RBP3.06□□□□□ -1.92
SMC4-224ENST00000494612 HMMRO75330 724 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 AP2A1O95782 977 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 IL1BP01584 269 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 LGALS2P05162 132 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 HPNP05981 417 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 ELK1P19419 428 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 GNA11P29992 359 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 SHMT2P34897 504 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 SCN4AP35499 1836 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 RPL13AP40429 203 aaKnown RBP3.06□□□□□ -1.92
SMC4-224ENST00000494612 AIF1P55008 147 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 AFDNP55196 1824 aaKnown RBP3.06□□□□□ -1.92
SMC4-224ENST00000494612 PRPS1P60891 318 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 ACTR1AP61163 376 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 SELENOTP62341 195 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 HMGN5P82970 282 aaKnown RBP3.06□□□□□ -1.92
SMC4-224ENST00000494612 PLD1Q13393 1074 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 CACNA1SQ13698 1873 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 GRB7Q14451 532 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 MESDQ14696 234 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 GANABQ14697 944 aaKnown RBP3.06□□□□□ -1.92
SMC4-224ENST00000494612 IL17AQ16552 155 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 PDZK1Q5T2W1 519 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 CROCCQ5TZA2 2017 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 OR4F3Q6IEY1 312 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 CASC1Q6TDU7 716 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 IL34Q6ZMJ4 242 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 FAM133AQ8N9E0 248 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 DCAF4L2Q8NA75 395 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 OR52H1Q8NGJ2 320 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 FAM110BQ8TC76 370 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 C7orf33Q8WU49 177 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 CMTM7Q96FZ5 175 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 IMMP1LQ96LU5 166 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 KIF20BQ96Q89 1820 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 RNF2Q99496 336 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 RPAP1Q9BWH6 1393 aaPredicted RBP3.06□□□□□ -1.92
SMC4-224ENST00000494612 APMAPQ9HDC9 416 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 AIG1Q9NVV5 245 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 THUMPD1Q9NXG2 353 aaKnown RBP3.06□□□□□ -1.92
SMC4-224ENST00000494612 KIF25Q9UIL4 384 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 BTNL2Q9UIR0 455 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 CDH9Q9ULB4 789 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms