RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SFRP5Q5T4F7 317 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 WBP2NLQ6ICG8 309 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 GALNT5Q7Z7M9 940 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 MAGEE2Q8TD90 523 aaPredicted RBP11.68□□□□□ -0.54
ERCC3-209ENST00000494464 GEMIN6Q8WXD5 167 aaKnown RBP11.68□□□□□ -0.54
ERCC3-209ENST00000494464 HS3ST6Q96QI5 342 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 ZNF347Q96SE7 839 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 BEX4Q9NWD9 120 aaPredicted RBP11.68□□□□□ -0.54
ERCC3-209ENST00000494464 ZNF232Q9UNY5 417 aa11.68□□□□□ -0.54
ERCC3-209ENST00000494464 ZNF814B7Z6K7 855 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 GPR171O14626 319 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 KLF4O43474 513 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 EIF1BO60739 113 aaKnown RBP11.67□□□□□ -0.54
ERCC3-209ENST00000494464 E2F6O75461 281 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 PGM3O95394 542 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 GKN3PP0CG01 181 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 THRBP10828 461 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 ITGA2P17301 1181 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 COX5AP20674 150 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 IL32P24001 234 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 ARHGDIAP52565 204 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 SLC35A1P78382 337 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 ADARB1P78563 741 aaKnown RBP11.67□□□□□ -0.54
ERCC3-209ENST00000494464 MYBPC1Q00872 1141 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 ITGADQ13349 1161 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 OTUD3Q5T2D3 398 aaPredicted RBP11.67□□□□□ -0.54
ERCC3-209ENST00000494464 TBPL2Q6SJ96 375 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 USP51Q70EK9 711 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 DHRSXQ8N5I4 330 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 RASSF5Q8WWW0 418 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 KISS1RQ969F8 398 aaPredicted RBP11.67□□□□□ -0.54
ERCC3-209ENST00000494464 S100PBPQ96BU1 408 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 TPD52L3Q96J77 140 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 EPYCQ99645 322 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 POTEKPQ9BYX7 375 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 PRSS50Q9UI38 385 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 MED13LQ71F56 2210 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 TEP1Q99973 2627 aaKnown RBP11.67□□□□□ -0.54
ERCC3-209ENST00000494464 ZC3H12DA2A288 527 aaKnown RBP11.67□□□□□ -0.54
ERCC3-209ENST00000494464 A6NHS1 94 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 hCG_2039718K7EN88 272 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 M0QX08 132 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 ADAP00813 363 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 IMPDH2P12268 514 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 CCNA2P20248 432 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 CXCR1P25024 350 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 EDNRAP25101 427 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 PRKAR1BP31321 381 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 OR2B6P58173 313 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 COPZ1P61923 177 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 ZNF311Q5JNZ3 666 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 KRT80Q6KB66 452 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 PAQR6Q6TCH4 344 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 C20orf204Q6ZNR8 217 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 TGIF2LYQ8IUE0 185 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 CLIP4Q8N3C7 705 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 PIP5K1AQ99755 562 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 REEP1Q9H902 201 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 VNN3Q9NY84 501 aa11.67□□□□□ -0.54
ERCC3-209ENST00000494464 ZNF469Q96JG9 3925 aaPredicted RBP11.66□□□□□ -0.54
ERCC3-209ENST00000494464 SNAP29O95721 258 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 OPN1SWP03999 348 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 SMIM18P0DKX4 95 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 PRG2P13727 222 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 CD247P20963 164 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 IDUAP35475 653 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 TAB1Q15750 504 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 ACKR1Q16570 336 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 BHLHA15Q7RTS1 189 aaPredicted RBP11.66□□□□□ -0.54
ERCC3-209ENST00000494464 SSX8Q7RTT4 187 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 TSEN54Q7Z6J9 526 aaKnown RBP11.66□□□□□ -0.54
ERCC3-209ENST00000494464 TMEM179BQ7Z7N9 219 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 WFDC8Q8IUA0 241 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 ZNF100Q8IYN0 542 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 CADM2Q8N3J6 435 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 HSD17B8Q92506 261 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 PIGTQ969N2 578 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 APH1AQ96BI3 265 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 C3orf49Q96BT1 292 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 DNAJA3Q96EY1 480 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 PLPPR2Q96GM1 343 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 ZNF607Q96SK3 696 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 TMEM204Q9BSN7 226 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 NAA11Q9BSU3 229 aaPredicted RBP11.66□□□□□ -0.54
ERCC3-209ENST00000494464 SPATA5L1Q9BVQ7 753 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 TMUB1Q9BVT8 246 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 UBTD1Q9HAC8 227 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 NGBQ9NPG2 151 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 NDUFAF4Q9P032 175 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 MALT1Q9UDY8 824 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 SLC9A8Q9Y2E8 581 aa11.66□□□□□ -0.54
ERCC3-209ENST00000494464 NOSIPQ9Y314 301 aaKnown RBP11.66□□□□□ -0.54
ERCC3-209ENST00000494464 SAMHD1Q9Y3Z3 626 aaKnown RBP11.66□□□□□ -0.54
ERCC3-209ENST00000494464 ITPR3Q14573 2671 aa11.65□□□□□ -0.54
ERCC3-209ENST00000494464 LIPT2A6NK58 231 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 A8MVM7 634 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 FRS3O43559 492 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 RAMP1O60894 148 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 NPIPB7O75200 414 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 MFN2O95140 757 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms