RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SIRT6Q8N6T7 355 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 POMGNT2Q8NAT1 580 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 OR4F15Q8NGB8 312 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 OR52E2Q8NGJ4 325 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 RNF217Q8TC41 542 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 ZFAND2BQ8WV99 257 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 ZNRF4Q8WWF5 429 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 THAP4Q8WY91 577 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 MIB2Q96AX9 1013 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 DDIT4LQ96D03 193 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 PLEKHA8Q96JA3 519 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 FER1L6-AS2Q96M78 137 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 Q96M85 177 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 TSPAN32Q96QS1 320 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 KATNB1Q9BVA0 655 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 OR11A1Q9GZK7 315 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 TSPAN10Q9H1Z9 355 aaPredicted RBP6.11□□□□□ -1.43
MSH5-217ENST00000494458 PTGES2Q9H7Z7 377 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 SACM1LQ9NTJ5 587 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 HPF1Q9NWY4 346 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 NDUFB11Q9NX14 153 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 TAS2R16Q9NYV7 291 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 STMN3Q9NZ72 180 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 H2AFY2Q9P0M6 372 aaPredicted RBP6.11□□□□□ -1.43
MSH5-217ENST00000494458 B3GAT1Q9P2W7 334 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 TNFRSF10DQ9UBN6 386 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 ZNF346Q9UL40 294 aaKnown RBP6.11□□□□□ -1.43
MSH5-217ENST00000494458 NOX1Q9Y5S8 564 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 MRPS18BQ9Y676 258 aaKnown RBP6.11□□□□□ -1.43
MSH5-217ENST00000494458 PTPRBP23467 1997 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 GVINP1Q7Z2Y8 2422 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 BLOC1S5-TXNDC5H3BN57 136 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 LINC01387J3KSC0 135 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 DNPH1O43598 174 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 SLC25A12O75746 678 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 CEACAM4O75871 244 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 AHSA1O95433 338 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 NUDT14O95848 222 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 HIST1H2ABP04908 130 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 INHBBP09529 407 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 OR2T7P0C7T2 308 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 CLUP10909 449 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 CD36P16671 472 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 IL11P20809 199 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 PAICSP22234 425 aaKnown RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 DPP4P27487 766 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 PSMB9P28065 219 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 RBMS1P29558 406 aaKnown RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 SRD5A2P31213 254 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 FGF9P31371 208 aaPredicted RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 PTGS2P35354 604 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 CD96P40200 585 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 CYB561P49447 251 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 ZNF41P51814 821 aaPredicted RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 AGFG1P52594 562 aaKnown RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 ZNF133P52736 654 aaPredicted RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 MLLT10P55197 1068 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 RPL27P61353 136 aaKnown RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 RAC1P63000 192 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 ERVK-25P63136 954 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 TUBA1BP68363 451 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 MYBPHQ13203 477 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 PON3Q15166 354 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 POU4F3Q15319 338 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 ACKR1Q16570 336 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 PCK2Q16822 640 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 CDONQ4KMG0 1287 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 MESTQ5EB52 335 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 FAM205BPQ63HN1 556 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 SLC6A19Q695T7 634 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 VASNQ6EMK4 673 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 C3orf33Q6P1S2 294 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 TUBA3EQ6PEY2 450 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 ZNF322Q6U7Q0 402 aaPredicted RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 TMPPEQ6ZT21 453 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 TUBA1AQ71U36 451 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 HIST3H2AQ7L7L0 130 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 NANOGNBQ7Z5D8 188 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 TIGD4Q8IY51 512 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 OR6V1Q8N148 313 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 BEST3Q8N1M1 668 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 SYS1Q8N2H4 156 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 MDS2Q8NDY4 140 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 OR1J4Q8NGS1 313 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 OR2T27Q8NH04 317 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 OR4K13Q8NH42 304 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 ZNF417Q8TAU3 575 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 ZPLD1Q8TCW7 415 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 DYNC2LI1Q8TCX1 351 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 RPS4Y2Q8TD47 263 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 SMPDL3BQ92485 455 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 HAS2Q92819 552 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 HIST1H2ACQ93077 130 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 THOC3Q96J01 351 aaKnown RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 ADGRG7Q96K78 797 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 GNRHR2Q96P88 292 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 ZNF587Q96SQ5 575 aaPredicted RBP6.1□□□□□ -1.43
MSH5-217ENST00000494458 NMNAT3Q96T66 252 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 TSC22D3Q99576 134 aa6.1□□□□□ -1.43
MSH5-217ENST00000494458 COQ7Q99807 217 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms