RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 POLR2J2Q9GZM3 115 aaKnown RBP16.77■□□□□ 0.28
PCMT1-209ENST00000494411 POLR2J3Q9H1A7 115 aaKnown RBP16.77■□□□□ 0.28
PCMT1-209ENST00000494411 CXXC4Q9H2H0 198 aa16.77■□□□□ 0.28
PCMT1-209ENST00000494411 RIMS3Q9UJD0 308 aa16.77■□□□□ 0.28
PCMT1-209ENST00000494411 RNF115Q9Y4L5 304 aa16.77■□□□□ 0.28
PCMT1-209ENST00000494411 SLC25A15Q9Y619 301 aa16.77■□□□□ 0.28
PCMT1-209ENST00000494411 DPRXA6NFQ7 191 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 OR6C65A6NJZ3 312 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 ZNF587BE7ETH6 402 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 PLPP3O14495 311 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 DCTN3O75935 186 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 CH25HO95992 272 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 CD3EP07766 207 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 NCK1P16333 377 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 CDH2P19022 906 aaPredicted RBP16.76■□□□□ 0.27
PCMT1-209ENST00000494411 POU3F1Q03052 451 aaPredicted RBP16.76■□□□□ 0.27
PCMT1-209ENST00000494411 TGFBR3Q03167 851 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 PUDPQ08623 228 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 C20orf204Q6ZNR8 217 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 LINGO2Q7L985 606 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 ABHD12BQ7Z5M8 362 aaPredicted RBP16.76■□□□□ 0.27
PCMT1-209ENST00000494411 NKAIN4Q8IVV8 208 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 OR5J2Q8NH18 312 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 ALPK1Q96QP1 1244 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 CCT8L2Q96SF2 557 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 ARL8BQ9NVJ2 186 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 MED13LQ71F56 2210 aa16.76■□□□□ 0.27
PCMT1-209ENST00000494411 MTORP42345 2549 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 HEATR1Q9H583 2144 aaKnown RBP16.75■□□□□ 0.27
PCMT1-209ENST00000494411 ACANP16112 2415 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 AKAP8O43823 692 aaKnown RBP16.75■□□□□ 0.27
PCMT1-209ENST00000494411 SLC43A1O75387 559 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 SERPINA1P01009 418 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 ZNF83P51522 516 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 UGT2B15P54855 530 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 SLC25A3Q00325 362 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 FOXD4Q12950 439 aaPredicted RBP16.75■□□□□ 0.27
PCMT1-209ENST00000494411 HIKESHIQ53FT3 197 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 TMEM123Q8N131 208 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 C17orf78Q8N4C9 275 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 LRRC17Q8N6Y2 441 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 WDR31Q8NA23 367 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 KBTBD8Q8NFY9 601 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 TMEM255BQ8WV15 326 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 AKAP1Q92667 903 aaKnown RBP eCLIP16.75■□□□□ 0.27
PCMT1-209ENST00000494411 FAM162AQ96A26 154 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 OR2M2Q96R28 347 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 CCL19Q99731 98 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 LINC00470Q9BZP3 86 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 FKRPQ9H9S5 495 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 MEPEQ9NQ76 525 aaPredicted RBP16.75■□□□□ 0.27
PCMT1-209ENST00000494411 NANSQ9NR45 359 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 SLC17A5Q9NRA2 495 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 ADA2Q9NZK5 511 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 TAGLN3Q9UI15 199 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 NOX1Q9Y5S8 564 aa16.75■□□□□ 0.27
PCMT1-209ENST00000494411 ZNF469Q96JG9 3925 aaPredicted RBP16.75■□□□□ 0.27
PCMT1-209ENST00000494411 HS3ST1O14792 307 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 SERPINI2O75830 405 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 ADORA3P0DMS8 318 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 THRBP10828 461 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 AHCYP23526 432 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 RBM34P42696 430 aaKnown RBP16.74■□□□□ 0.27
PCMT1-209ENST00000494411 ADAM5Q6NVV9 412 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 CBLL1Q75N03 491 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 SLC46A3Q7Z3Q1 461 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 RNF148Q8N7C7 305 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 PFN4Q8NHR9 129 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 NEUROG1Q92886 237 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 HSH2DQ96JZ2 352 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 PRRC1Q96M27 445 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 BEX4Q9NWD9 120 aaPredicted RBP16.74■□□□□ 0.27
PCMT1-209ENST00000494411 MED29Q9NX70 200 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 EGFL7Q9UHF1 273 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 ZNF229Q9UJW7 825 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 A4GNTQ9UNA3 340 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 SNX13Q9Y5W8 968 aa16.74■□□□□ 0.27
PCMT1-209ENST00000494411 USF3Q68DE3 2245 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 C11orf98E9PRG8 122 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 OR6A2O95222 327 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 IFNW1P05000 195 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 UMPSP11172 480 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 HOXC12P31275 282 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 YAP1P46937 504 aaKnown RBP16.73■□□□□ 0.27
PCMT1-209ENST00000494411 ROR2Q01974 943 aaKnown RBP16.73■□□□□ 0.27
PCMT1-209ENST00000494411 IFI44LQ53G44 452 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 CARD17Q5XLA6 110 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 HMBOX1Q6NT76 420 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 NHLRC1Q6VVB1 395 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 PXKQ7Z7A4 578 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 WDFY1Q8IWB7 410 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 GPR137CQ8N3F9 429 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 ANKS4BQ8N8V4 417 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 PIK3C3Q8NEB9 887 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 OR1K1Q8NGR3 316 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 LILRB1Q8NHL6 650 aaPredicted RBP16.73■□□□□ 0.27
PCMT1-209ENST00000494411 TMEM239Q8WW34 195 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 GEMIN6Q8WXD5 167 aaKnown RBP16.73■□□□□ 0.27
PCMT1-209ENST00000494411 TXNDC15Q96J42 360 aa16.73■□□□□ 0.27
PCMT1-209ENST00000494411 EMC6Q9BV81 110 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms