RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 KMOO15229 486 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 TAPBPO15533 448 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 RAMP3O60896 148 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 RNASEH1O60930 286 aaKnown RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 RFPL2O75678 378 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ADAP1O75689 374 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 SC5DO75845 299 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 LRATO95237 230 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ACTL6AO96019 429 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 IFNA5P01569 189 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 FGGP02679 453 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 IFNW1P05000 195 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 IGF1P05019 195 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 KLK1P06870 262 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CT62P0C5K7 136 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CDH1P12830 882 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CD59P13987 128 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 IMPDH1P20839 514 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ZP3P21754 424 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CXCR2P25025 360 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 IVDP26440 423 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 SERPINB1P30740 379 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 OR1E1P30953 314 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CALCRP30988 508 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 IFNA8P32881 189 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 DUTP33316 252 aaKnown RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 SFTPDP35247 375 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 TGFBR2P37173 567 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 MAP3K8P41279 467 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 NKX2-1P43699 371 aaPredicted RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 GPR1P46091 355 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 DNASE1L1P49184 302 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CSRP3P50461 194 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CDK9P50750 372 aaKnown RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 SGSHP51688 502 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 XKP51811 444 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 PRELPP51888 382 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 KPNA2P52292 529 aaKnown RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CLDN17P56750 224 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 PAX2Q02962 417 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF33BQ06732 778 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CKAP4Q07065 602 aaKnown RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 MFGE8Q08431 387 aaPredicted RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 KLRB1Q12918 225 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 BNIP2Q12982 314 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 SELENBP1Q13228 472 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 GPR50Q13585 617 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CEACAM7Q14002 265 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 TFDP1Q14186 410 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ATXN7L3Q14CW9 347 aaPredicted RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 EMC2Q15006 297 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 PSG5Q15238 335 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ZNHIT3Q15649 155 aaPredicted RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF77Q15935 545 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 POU2AF1Q16633 256 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 PHKG1Q16816 387 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 KCTD19Q17RG1 926 aaPredicted RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 EIF2S3LQ2VIR3 472 aaKnown RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 MS4A18Q3C1V0 323 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 BSXQ3C1V8 233 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF876PQ49A33 203 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CCDC58Q4VC31 144 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ZCWPW2Q504Y3 356 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF542PQ5EBM4 170 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 LY6G6FQ5SQ64 297 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 IDNKQ5T6J7 187 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 SDHAF4Q5VUM1 108 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 LPCAT4Q643R3 524 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 OR4A47Q6IF82 309 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 TRNP1Q6NT89 227 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 APOBEC3HQ6NTF7 200 aaKnown RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 LEG1Q6P5S2 330 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ENPP6Q6UWR7 440 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CERS6Q6ZMG9 384 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 C19orf35Q6ZS72 473 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 Q7L0L9 218 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ASRGL1Q7L266 308 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 SSX6Q7RTT6 188 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 OR2W3Q7Z3T1 314 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 COX8CQ7Z4L0 72 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 NET1Q7Z628 596 aaPredicted RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 SETD3Q86TU7 594 aaPredicted RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 GTSCR1Q86UQ5 136 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 C17orf64Q86WR6 236 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 HIPK1Q86Z02 1210 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 MMD2Q8IY49 270 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 HS3ST5Q8IZT8 346 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 LGI2Q8N0V4 545 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 PGAM4Q8N0Y7 254 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ADAD2Q8NCV1 583 aaKnown RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 NPEPL1Q8NDH3 523 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 CATSPER1Q8NEC5 780 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 OR4F6Q8NGB9 312 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 OR10A7Q8NGE5 316 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 OR10V1Q8NGI7 309 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 OR2V1Q8NHB1 315 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 ARRDC2Q8TBH0 407 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 RDH11Q8TC12 318 aa1.91□□□□□ -2.1
PTPN12-212ENST00000494248 MAGEE2Q8TD90 523 aaPredicted RBP1.91□□□□□ -2.1
PTPN12-212ENST00000494248 FAM222BQ8WU58 562 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms