RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 HIPK2Q9H2X6 1198 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 OR51B6Q9H340 312 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 OSGIN1Q9UJX0 560 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 EXT1Q16394 746 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 Q499Y3 187 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF546Q86UE3 836 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 OR5T1Q8NG75 326 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 DUSP19Q8WTR2 217 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 TMEM255BQ8WV15 326 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 METTL17Q9H7H0 456 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-207ENST00000494090 GCM1Q9NP62 436 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 PADI1Q9ULC6 663 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 TMEM72A0PK05 275 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 KLRC4-KLRK1H3BQV0 150 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 IGLV3-25P01717 112 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 FKBP2P26885 142 aaKnown RBP17.72■□□□□ 0.43
COL27A1-207ENST00000494090 CD79BP40259 229 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 GPLD1P80108 840 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF92Q03936 586 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF419Q96HQ0 510 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-207ENST00000494090 CEBPZOSA8MTT3 80 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 DPP4P27487 766 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 APEX1P27695 318 aaKnown RBP17.71■□□□□ 0.43
COL27A1-207ENST00000494090 OR5M10Q6IEU7 315 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 DPY19L2P2Q6ZN68 376 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 PRICKLE2Q7Z3G6 844 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 LYSMD2Q8IV50 215 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 LILRA3Q8N6C8 439 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-207ENST00000494090 SMAP2Q8WU79 429 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-207ENST00000494090 SLC19A3Q9BZV2 496 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 KCNJ16Q9NPI9 418 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 COQ3Q9NZJ6 369 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 STEAP1Q9UHE8 339 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 MCRIP1C9JLW8 97 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 F2RL1P55085 397 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 MAT1AQ00266 395 aaKnown RBP17.71■□□□□ 0.43
COL27A1-207ENST00000494090 LGALS14Q8TCE9 139 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 PHYHIPQ92561 330 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 MIB2Q96AX9 1013 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 A0A1B0GWA3 101 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 A0A1W2PPV4 95 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 SOCS6O14544 535 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 UTS2O95399 124 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 IFNA17P01571 189 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 LIPCP11150 499 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 HMGA1P17096 107 aaKnown RBP17.71■□□□□ 0.43
COL27A1-207ENST00000494090 PCSK6P29122 969 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 ETV5P41161 510 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 B3GLCTQ6Y288 498 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 PPA2Q9H2U2 334 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 EHFQ9NZC4 300 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 TMED7-TICAM2A0A0A6YYA0 188 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 HOXC11O43248 304 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-207ENST00000494090 ENPP1P22413 925 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 IDH3GP51553 393 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-207ENST00000494090 SLC14A1Q13336 389 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 MFSD12Q6NUT3 480 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 BPHLQ86WA6 291 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF679Q8IYX0 411 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 YARS2Q9Y2Z4 477 aaKnown RBP17.71■□□□□ 0.43
COL27A1-207ENST00000494090 TMED7Q9Y3B3 224 aa17.71■□□□□ 0.43
COL27A1-207ENST00000494090 A0A0D9SG52 128 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 SLC5A10A0PJK1 596 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 PRKRAO75569 313 aaKnown RBP17.7■□□□□ 0.42
COL27A1-207ENST00000494090 BCL6P41182 706 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 CRMP1Q14194 572 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 SH2D5Q6ZV89 423 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 RFPL4BQ6ZWI9 263 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 TSSK2Q96PF2 358 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 GABARAPL1Q9H0R8 117 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 KIR3DX1Q9H7L2 352 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 WDR76Q9H967 626 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 ATG4BQ9Y4P1 393 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 SURF4O15260 269 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 DDAH2O95865 285 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 PIPP12273 146 aaPredicted RBP17.7■□□□□ 0.42
COL27A1-207ENST00000494090 GABRA2P47869 451 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 TAS2R30P59541 319 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 MFAP5Q13361 173 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 STK35Q8TDR2 534 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 LIN7BQ9HAP6 207 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 ATP13A2Q9NQ11 1180 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 hCG_1809904A0A1W2PP81 198 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 A0A1W2PPE2 198 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 A0A1W2PR64 198 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 A0A1W2PRV1 198 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 LINC01553A4QN01 128 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 TNFRSF10AO00220 468 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 OLFM2O95897 454 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 OPN1LWP04000 364 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 HYAL4Q2M3T9 481 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 LCN10Q6JVE6 187 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 LPCAT3Q6P1A2 487 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 COX15Q7KZN9 410 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 FAM109AQ8N4B1 249 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 MBOAT4Q96T53 435 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 PDFQ9HBH1 243 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 A0A1W2PS29 197 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 TMEM82A0PJX8 343 aa17.7■□□□□ 0.42
COL27A1-207ENST00000494090 GFYI3L273 518 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms