RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CSNK1DP48730 415 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 CEBPDP49716 269 aaPredicted RBP2.27□□□□□ -2.05
SMC4-223ENST00000493695 GPM6AP51674 278 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 CRISP3P54108 245 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 ATP1B3P54709 279 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 AIF1P55008 147 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 FGL1Q08830 312 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 NCBP1Q09161 790 aaKnown RBP2.27□□□□□ -2.05
SMC4-223ENST00000493695 ZNF77Q15935 545 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 BOLA3Q53S33 107 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 DMRTC1Q5HYR2 192 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 MARCH8Q5T0T0 291 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 CYB5R2Q6BCY4 276 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 CENPPQ6IPU0 288 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 CASC1Q6TDU7 716 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 C6orf89Q6UWU4 347 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 ZNF620Q6ZNG0 422 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 EFL1Q7Z2Z2 1120 aaKnown RBP2.27□□□□□ -2.05
SMC4-223ENST00000493695 ZNF571Q7Z3V5 609 aaPredicted RBP2.27□□□□□ -2.05
SMC4-223ENST00000493695 PAQR7Q86WK9 346 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 ARIH2OSQ8N7S6 290 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 EIF1ADQ8N9N8 165 aaKnown RBP2.27□□□□□ -2.05
SMC4-223ENST00000493695 MDS2Q8NDY4 140 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 OR10G9Q8NGN4 311 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 OR6X1Q8NH79 312 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 OR9G1Q8NH87 305 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 NDRG1Q92597 394 aaKnown RBP2.27□□□□□ -2.05
SMC4-223ENST00000493695 LRRC58Q96CX6 371 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 C10orf35Q96D05 121 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 RNF185Q96GF1 192 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 FN3KRPQ9HA64 309 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 GIN1Q9NXP7 522 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 ZNF639Q9UID6 485 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 PIGLQ9Y2B2 252 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 ASTN1O14525 1302 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 PHF3Q92576 2039 aaKnown RBP2.26□□□□□ -2.05
SMC4-223ENST00000493695 A0A1W2PPV9 198 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 CCDC182A6NF36 153 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 FAM166BA8MTA8 275 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 ZNF208O43345 1280 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 MED7O43513 233 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 TIMM8AO60220 97 aaPredicted RBP2.26□□□□□ -2.05
SMC4-223ENST00000493695 OXSR1O95747 527 aaPredicted RBP2.26□□□□□ -2.05
SMC4-223ENST00000493695 IL1BP01584 269 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 FGF1P05230 155 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 VHLP40337 213 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 SH3BGRP55822 239 aaPredicted RBP2.26□□□□□ -2.05
SMC4-223ENST00000493695 UNC119Q13432 240 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 KIAA0087Q14695 138 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 GNMTQ14749 295 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 PTGES3Q15185 160 aaKnown RBP2.26□□□□□ -2.05
SMC4-223ENST00000493695 ENPP6Q6UWR7 440 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 ZNF546Q86UE3 836 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 ZNF429Q86V71 674 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 NUDCD3Q8IVD9 361 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 CCDC65Q8IXS2 484 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 BHLHE23Q8NDY6 225 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 VN1R2Q8NFZ6 395 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 CXorf40BQ96DE9 158 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 RPRD1AQ96P16 312 aaPredicted RBP2.26□□□□□ -2.05
SMC4-223ENST00000493695 COPS8Q99627 209 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 CCT7Q99832 543 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 SRMSQ9H3Y6 488 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 ANKRD19PQ9H560 264 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 RNF167Q9H6Y7 350 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 LRRC40Q9H9A6 602 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 GLRX2Q9NS18 164 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 HOXC10Q9NYD6 342 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 XCL2Q9UBD3 114 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 TMCO1Q9UM00 188 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 CLEC4AQ9UMR7 237 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 TRAF3IP3Q9Y228 551 aa2.26□□□□□ -2.05
SMC4-223ENST00000493695 MTCL1Q9Y4B5 1905 aaKnown RBP2.26□□□□□ -2.05
SMC4-223ENST00000493695 TRBV6-6A0A0A6YYG2 114 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 OR5B21A6NL26 309 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 PCCAP05165 728 aaPredicted RBP2.25□□□□□ -2.05
SMC4-223ENST00000493695 CD5P06127 495 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 ZNF823P16415 610 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 CD1CP29017 333 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 FMO3P31513 532 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 FDFT1P37268 417 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 YAP1P46937 504 aaKnown RBP2.25□□□□□ -2.05
SMC4-223ENST00000493695 NPBWR2P48146 333 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 ERVK-25P63136 954 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 OGDHQ02218 1023 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 SCRN3Q0VDG4 424 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 EIF4EBP1Q13541 118 aaPredicted RBP2.25□□□□□ -2.05
SMC4-223ENST00000493695 CYTH1Q15438 398 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 C6orf226Q5I0X4 101 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 RGS9BPQ6ZS82 235 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 ZNF621Q6ZSS3 439 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 SLC25A48Q6ZT89 311 aaKnown RBP2.25□□□□□ -2.05
SMC4-223ENST00000493695 H2BFWTQ7Z2G1 175 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 TMEM61Q8N0U2 210 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 OR8J1Q8NGP2 316 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 FAM110BQ8TC76 370 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 ZNF606Q8WXB4 792 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 TRIM62Q9BVG3 475 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 RSPO3Q9BXY4 272 aaPredicted RBP2.25□□□□□ -2.05
SMC4-223ENST00000493695 ACTR6Q9GZN1 396 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms