RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 GON4LQ3T8J9 2241 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 CUX1P39880 1505 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 KCNE1BA0A087WTH5 132 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 A0A1B0GUH1 482 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 DHRS7CA6NNS2 312 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 DYNC1I1O14576 645 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 VENTXO95231 258 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 CLIC3O95833 236 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 ATP6V1B2P21281 511 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 MAGEA9P43362 315 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 YAP1P46937 504 aaKnown RBP3.68□□□□□ -1.82
VPS13A-212ENST00000493341 PRELPP51888 382 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 PLK1P53350 603 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 IST1P53990 364 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 FBXW4P57775 412 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 ARL6IP1Q15041 203 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 HSDL1Q3SXM5 330 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 KLHL22Q53GT1 634 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 BEX5Q5H9J7 111 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 SLC25A25Q6KCM7 469 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 PLA2G4DQ86XP0 818 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 PRR22Q8IZ63 422 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 LIX1Q8N485 282 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 FNDC5Q8NAU1 212 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 OR2A12Q8NGT7 310 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 ZNF564Q8TBZ8 553 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-212ENST00000493341 CA5BP1Q8WTZ4 195 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 CAPSLQ8WWF8 208 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 TOP1MTQ969P6 601 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 XPO6Q96QU8 1125 aaKnown RBP3.68□□□□□ -1.82
VPS13A-212ENST00000493341 SORT1Q99523 831 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 SYT11Q9BT88 431 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 SRXN1Q9BYN0 137 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 NEUROG2Q9H2A3 272 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 RNF167Q9H6Y7 350 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 MYOZ2Q9NPC6 264 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 ZNHIT6Q9NWK9 470 aaKnown RBP3.68□□□□□ -1.82
VPS13A-212ENST00000493341 SENP1Q9P0U3 644 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 UXTQ9UBK9 157 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-212ENST00000493341 B4GALT7Q9UBV7 327 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 ZMAT5Q9UDW3 170 aaKnown RBP3.68□□□□□ -1.82
VPS13A-212ENST00000493341 PROCRQ9UNN8 238 aa3.68□□□□□ -1.82
VPS13A-212ENST00000493341 CDHR2Q9BYE9 1310 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 PBRM1Q86U86 1689 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 A0A0J9YYE9 177 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 FAM220BPB1ANY3 271 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 SHISA9B4DS77 424 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 M0R3G1 203 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 PSMD11O00231 422 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 CCL21O00585 134 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 CLPXO76031 633 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 TRBC1P01850 177 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 SERPINE2P07093 398 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 CLTAP09496 248 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 OR8U8P0C7N1 319 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 SLC35E2P0CK97 266 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 ZFP36L1Q07352 338 aaKnown RBP3.67□□□□□ -1.82
VPS13A-212ENST00000493341 PARP15Q460N3 678 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 SLC22A6Q4U2R8 563 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 MARCH8Q5T0T0 291 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 LIN9Q5TKA1 542 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 TRIM40Q6P9F5 258 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 SLC26A11Q86WA9 606 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 CMTM8Q8IZV2 173 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 ABHD12Q8N2K0 398 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 TTC29Q8NA56 475 aaPredicted RBP3.67□□□□□ -1.82
VPS13A-212ENST00000493341 TMEM104Q8NE00 496 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 FBXL13Q8NEE6 735 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 OR4A15Q8NGL6 344 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 OR2G2Q8NGZ5 317 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 LILRB4Q8NHJ6 448 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 LKAAEAR1Q8TD35 194 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 CD300LFQ8TDQ1 290 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 C18orf12Q96KH6 178 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 PGLYRP4Q96LB8 373 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 DUX3Q96PT4 197 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 NAT9Q9BTE0 207 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 LRRC61Q9BV99 259 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 BARHL1Q9BZE3 327 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 FOLH1BQ9HBA9 442 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 GIN1Q9NXP7 522 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 STYXL1Q9Y6J8 313 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 ZNF608Q9ULD9 1512 aaPredicted RBP3.67□□□□□ -1.82
VPS13A-212ENST00000493341 ABCA5Q8WWZ7 1642 aa3.67□□□□□ -1.82
VPS13A-212ENST00000493341 IGLV3-22A0A075B6J6 115 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 IGKV1D-8A0A087WSZ0 117 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 NDUFAB1O14561 156 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 SOX15O60248 233 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 FCN3O75636 299 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 FGFR1OPO95684 399 aaKnown RBP3.66□□□□□ -1.82
VPS13A-212ENST00000493341 MGMTP16455 207 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 PAX2Q02962 417 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 TLE4Q04727 773 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 ELAVL2Q12926 359 aaKnown RBP3.66□□□□□ -1.82
VPS13A-212ENST00000493341 OR5M10Q6IEU7 315 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 ARCQ7LC44 396 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 EID2Q8N6I1 236 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 LRRC75AQ8NAA5 344 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 PIH1D2Q8WWB5 315 aa3.66□□□□□ -1.82
VPS13A-212ENST00000493341 OR1E3Q8WZA6 343 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms