RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 DEF8Q6ZN54 512 aa21.62■■□□□ 1.05
UPF3A-209ENST00000492270 ABHD12BQ7Z5M8 362 aaPredicted RBP21.62■■□□□ 1.05
UPF3A-209ENST00000492270 LRRC75A-AS1Q8N1F1 130 aa21.62■■□□□ 1.05
UPF3A-209ENST00000492270 SCAIQ8N9R8 606 aa21.62■■□□□ 1.05
UPF3A-209ENST00000492270 OR1K1Q8NGR3 316 aa21.62■■□□□ 1.05
UPF3A-209ENST00000492270 TMEM171Q8WVE6 324 aa21.62■■□□□ 1.05
UPF3A-209ENST00000492270 PRSS27Q9BQR3 290 aa21.62■■□□□ 1.05
UPF3A-209ENST00000492270 LINC00470Q9BZP3 86 aa21.62■■□□□ 1.05
UPF3A-209ENST00000492270 AMDHD2Q9Y303 409 aa21.62■■□□□ 1.05
UPF3A-209ENST00000492270 NME4O00746 187 aa21.61■■□□□ 1.05
UPF3A-209ENST00000492270 SOD3P08294 240 aa21.61■■□□□ 1.05
UPF3A-209ENST00000492270 DANCRP0C864 163 aa21.61■■□□□ 1.05
UPF3A-209ENST00000492270 KDELR2P33947 212 aa21.61■■□□□ 1.05
UPF3A-209ENST00000492270 SLC7A2P52569 658 aa21.61■■□□□ 1.05
UPF3A-209ENST00000492270 CDH11P55287 796 aa21.61■■□□□ 1.05
UPF3A-209ENST00000492270 POU3F1Q03052 451 aaPredicted RBP21.61■■□□□ 1.05
UPF3A-209ENST00000492270 C8orf82Q6P1X6 216 aaPredicted RBP21.61■■□□□ 1.05
UPF3A-209ENST00000492270 TTC33Q6PID6 262 aaPredicted RBP21.61■■□□□ 1.05
UPF3A-209ENST00000492270 ARPINQ7Z6K5 226 aa21.61■■□□□ 1.05
UPF3A-209ENST00000492270 WDFY1Q8IWB7 410 aa21.61■■□□□ 1.05
UPF3A-209ENST00000492270 UEVLDQ8IX04 471 aa21.61■■□□□ 1.05
UPF3A-209ENST00000492270 PIAS4Q8N2W9 510 aaPredicted RBP21.61■■□□□ 1.05
UPF3A-209ENST00000492270 OR2M2Q96R28 347 aa21.61■■□□□ 1.05
UPF3A-209ENST00000492270 ZNF426Q9BUY5 554 aa21.61■■□□□ 1.05
UPF3A-209ENST00000492270 EMC6Q9BV81 110 aa21.61■■□□□ 1.05
UPF3A-209ENST00000492270 MRPL39Q9NYK5 338 aaKnown RBP21.61■■□□□ 1.05
UPF3A-209ENST00000492270 LOC102725191A0A1B0GVB3 256 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 OR6C65A6NJZ3 312 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 SNX3O60493 162 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 SLC43A1O75387 559 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 CH25HO95992 272 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 CD40P25942 277 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 PTH2RP49190 550 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 NUDT2P50583 147 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 ROR2Q01974 943 aaKnown RBP21.6■■□□□ 1.05
UPF3A-209ENST00000492270 LIPEQ05469 1076 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 PUDPQ08623 228 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 KLHL17Q6TDP4 642 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 TMEM108Q6UXF1 575 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 NHLRC1Q6VVB1 395 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 TMEM123Q8N131 208 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 TXNDC15Q96J42 360 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 TPD52L3Q96J77 140 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 NELFAQ9H3P2 528 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 DLL4Q9NR61 685 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 MED29Q9NX70 200 aa21.6■■□□□ 1.05
UPF3A-209ENST00000492270 PLPP3O14495 311 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 SERPINI2O75830 405 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 MT-ATP6P00846 226 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 IFNA14P01570 189 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 PTAFRP25105 342 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 ZNF74Q16587 644 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 PGGHGQ32M88 737 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 TBRG1Q3YBR2 411 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 PHYHD1Q5SRE7 291 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 SHEQ5VZ18 495 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 CARD17Q5XLA6 110 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 HMBOX1Q6NT76 420 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 NKAIN4Q8IVV8 208 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 LRRC17Q8N6Y2 441 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 OR5J2Q8NH18 312 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 SMAP2Q8WU79 429 aaPredicted RBP21.59■■□□□ 1.05
UPF3A-209ENST00000492270 ZNF837Q96EG3 531 aaPredicted RBP21.59■■□□□ 1.05
UPF3A-209ENST00000492270 MPP4Q96JB8 637 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 GSX2Q9BZM3 304 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 NSRP1Q9H0G5 558 aaKnown RBP21.59■■□□□ 1.05
UPF3A-209ENST00000492270 EFCAB1Q9HAE3 211 aa21.59■■□□□ 1.05
UPF3A-209ENST00000492270 MEPEQ9NQ76 525 aaPredicted RBP21.59■■□□□ 1.05
UPF3A-209ENST00000492270 CISD1Q9NZ45 108 aaKnown RBP21.59■■□□□ 1.05
UPF3A-209ENST00000492270 MAGED1Q9Y5V3 778 aaPredicted RBP21.59■■□□□ 1.05
UPF3A-209ENST00000492270 MTORP42345 2549 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 A0A096LPE4 126 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 A0A1W2PPZ6 126 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 C11orf98E9PRG8 122 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 AHCYP23526 432 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 TAS2R41P59536 307 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 PRPS1P60891 318 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 RPS4XP62701 263 aaKnown RBP21.58■■□□□ 1.05
UPF3A-209ENST00000492270 GNGT1P63211 74 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 TUBA1BP68363 451 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 TUBA4AP68366 448 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 PIN1Q13526 163 aaPredicted RBP21.58■■□□□ 1.05
UPF3A-209ENST00000492270 KLHL24Q6TFL4 600 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 TUBA1AQ71U36 451 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 CPLX4Q7Z7G2 160 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 BCL2L2Q92843 193 aaPredicted RBP21.58■■□□□ 1.05
UPF3A-209ENST00000492270 BOD1Q96IK1 185 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 CXorf56Q9H5V9 222 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 GPR35Q9HC97 309 aa21.58■■□□□ 1.05
UPF3A-209ENST00000492270 GMNCA6NCL1 334 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 RPL36A-HNRNPH2H7BZ11 118 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 ARHGEF9O43307 516 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 AKAP8O43823 692 aaKnown RBP21.57■■□□□ 1.04
UPF3A-209ENST00000492270 ADORA3P0DMS8 318 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 GSK3BP49841 420 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 UGT2B15P54855 530 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 CEACAM16Q2WEN9 425 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 SLC22A25Q6T423 547 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 HACD2Q6Y1H2 254 aa21.57■■□□□ 1.04
UPF3A-209ENST00000492270 B3GLCTQ6Y288 498 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms