RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 HDHD5Q9BXW7 423 aa13.38□□□□□ -0.27
SS18L1-204ENST00000491916 PARPBPQ9NWS1 579 aa13.38□□□□□ -0.27
SS18L1-204ENST00000491916 ACTR3BQ9P1U1 418 aa13.38□□□□□ -0.27
SS18L1-204ENST00000491916 NDRG3Q9UGV2 375 aa13.38□□□□□ -0.27
SS18L1-204ENST00000491916 ZNF229Q9UJW7 825 aa13.38□□□□□ -0.27
SS18L1-204ENST00000491916 SAMD4AQ9UPU9 718 aaKnown RBP13.38□□□□□ -0.27
SS18L1-204ENST00000491916 CADP27708 2225 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 A0A087WUU8 490 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 ACOT8O14734 319 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 OR7A10O76100 309 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 CLDN17P56750 224 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 PUDPQ08623 228 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 FAPQ12884 760 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 BNIP1Q12981 228 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 PMS2P3Q13401 168 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 PGM2L1Q6PCE3 622 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 TBPL2Q6SJ96 375 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 NSMCE2Q96MF7 247 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 MED18Q9BUE0 208 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 ASPNQ9BXN1 380 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 NMNAT1Q9HAN9 279 aaPredicted RBP13.37□□□□□ -0.27
SS18L1-204ENST00000491916 NANSQ9NR45 359 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 PRPF19Q9UMS4 504 aaKnown RBP13.37□□□□□ -0.27
SS18L1-204ENST00000491916 V9GYQ6 96 aa13.37□□□□□ -0.27
SS18L1-204ENST00000491916 hCG_2039718K7EN88 272 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 UPK3AO75631 287 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 DIRAS1O95057 198 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 PPP3CBP16298 524 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 ZNF43P17038 809 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 RHCEP18577 417 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 FUT1P19526 365 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 MAKP20794 623 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 GTF2E2P29084 291 aaKnown RBP13.36□□□□□ -0.27
SS18L1-204ENST00000491916 TRIM25Q14258 630 aaKnown RBP13.36□□□□□ -0.27
SS18L1-204ENST00000491916 TRAM2Q15035 370 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 TAB1Q15750 504 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 PHYHD1Q5SRE7 291 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 LCN8Q6JVE9 175 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 CYP2R1Q6VVX0 501 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 BHLHA15Q7RTS1 189 aaPredicted RBP13.36□□□□□ -0.27
SS18L1-204ENST00000491916 PXKQ7Z7A4 578 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 MEX3DQ86XN8 651 aaKnown RBP13.36□□□□□ -0.27
SS18L1-204ENST00000491916 C10orf53Q8N6V4 93 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 STEAP2Q8NFT2 490 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 SLC7A13Q8TCU3 470 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 KISS1RQ969F8 398 aaPredicted RBP13.36□□□□□ -0.27
SS18L1-204ENST00000491916 SGTBQ96EQ0 304 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 ZC3HAV1LQ96H79 300 aaKnown RBP13.36□□□□□ -0.27
SS18L1-204ENST00000491916 BOD1Q96IK1 185 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 MUS81Q96NY9 551 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 OR2M2Q96R28 347 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 FNDC11Q9BVV2 318 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 SLCO5A1Q9H2Y9 848 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 ASB6Q9NWX5 421 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 C6orf203Q9P0P8 240 aaPredicted RBP13.36□□□□□ -0.27
SS18L1-204ENST00000491916 RCE1Q9Y256 329 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 MED31Q9Y3C7 131 aa13.36□□□□□ -0.27
SS18L1-204ENST00000491916 ANKRD17O75179 2603 aaKnown RBP13.36□□□□□ -0.27
SS18L1-204ENST00000491916 A0A1W2PRQ8 180 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 NQO1P15559 274 aaKnown RBP13.35□□□□□ -0.27
SS18L1-204ENST00000491916 PRKCDQ05655 676 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 DGCR6Q14129 220 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 SEC23BQ15437 767 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 GABRA6Q16445 453 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 NIPAL3Q6P499 406 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 UEVLDQ8IX04 471 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 UBE2J2Q8N2K1 259 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 WDR31Q8NA23 367 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 ACOT11Q8WXI4 607 aaPredicted RBP13.35□□□□□ -0.27
SS18L1-204ENST00000491916 NRGNQ92686 78 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 ZNF837Q96EG3 531 aaPredicted RBP13.35□□□□□ -0.27
SS18L1-204ENST00000491916 HS3ST6Q96QI5 342 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 THTPAQ9BU02 230 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 EMC6Q9BV81 110 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 LINC00470Q9BZP3 86 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 ANKRD19PQ9H560 264 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 PLEKHF2Q9H8W4 249 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 IL1RAPQ9NPH3 570 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 MED29Q9NX70 200 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 TAS2R16Q9NYV7 291 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 NOX1Q9Y5S8 564 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 CCDC168Q8NDH2 2452 aa13.35□□□□□ -0.27
SS18L1-204ENST00000491916 VPS13CQ709C8 3753 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 TRBV4-1A0A0J9YWV2 114 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 C11orf98E9PRG8 122 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 RPL36A-HNRNPH2H7BZ11 118 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 GMNNO75496 209 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 GOSR1O95249 250 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 ADORA3P0DMS8 318 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 IL32P24001 234 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 MPGP29372 298 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 DNAJA1P31689 397 aaKnown RBP13.34□□□□□ -0.27
SS18L1-204ENST00000491916 RPS4XP62701 263 aaKnown RBP13.34□□□□□ -0.27
SS18L1-204ENST00000491916 POU3F1Q03052 451 aaPredicted RBP13.34□□□□□ -0.27
SS18L1-204ENST00000491916 C1DQ13901 141 aaKnown RBP13.34□□□□□ -0.27
SS18L1-204ENST00000491916 LAPTM4AQ15012 233 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 C9orf135Q5VTT2 229 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 PODNL1Q6PEZ8 512 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 MBOAT2Q6ZWT7 520 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 CDC20BQ86Y33 519 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms