RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ITM2AO43736 263 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 SPAG7O75391 227 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 PNPP00491 289 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 HLA-HP01893 362 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 TFP02787 698 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 TFPTP0C1Z6 253 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 H2AFXP16104 143 aaPredicted RBP11.33□□□□□ -0.6
USF1-206ENST00000491629 IL7RP16871 459 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 ZNF14P17017 642 aaPredicted RBP11.33□□□□□ -0.6
USF1-206ENST00000491629 ADRA2CP18825 462 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 CHI3L1P36222 383 aaPredicted RBP11.33□□□□□ -0.6
USF1-206ENST00000491629 CDKN2CP42773 168 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 HPCAP84074 193 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 MAD2L1Q13257 205 aaPredicted RBP11.33□□□□□ -0.6
USF1-206ENST00000491629 SMU1Q2TAY7 513 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 HOMEZQ8IX15 550 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 TMEM123Q8N131 208 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 CLIP4Q8N3C7 705 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 CADM2Q8N3J6 435 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 RIBC1Q8N443 379 aaPredicted RBP11.33□□□□□ -0.6
USF1-206ENST00000491629 OR51F2Q8NH61 342 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 RDH5Q92781 318 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 TESCQ96BS2 214 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 CCDC115Q96NT0 180 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 RHOXF2Q9BQY4 288 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 TAPBPLQ9BX59 468 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 RSPO3Q9BXY4 272 aaPredicted RBP11.33□□□□□ -0.6
USF1-206ENST00000491629 DPY30Q9C005 99 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 ZNF696Q9H7X3 374 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 SLC6A13Q9NSD5 602 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 FZR1Q9UM11 496 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 GRIP1Q9Y3R0 1128 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 DSPPQ9NZW4 1301 aa11.33□□□□□ -0.6
USF1-206ENST00000491629 VSTM5A8MXK1 200 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 DEAF1O75398 565 aaPredicted RBP11.32□□□□□ -0.6
USF1-206ENST00000491629 GSNP06396 782 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 DBIP07108 87 aaKnown RBP11.32□□□□□ -0.6
USF1-206ENST00000491629 CREB1P16220 341 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 IL12AP29459 219 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 MVDP53602 400 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 TMEM33P57088 247 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 CHI3L2Q15782 390 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 PDCD2Q16342 344 aaPredicted RBP11.32□□□□□ -0.6
USF1-206ENST00000491629 FXNQ16595 210 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 TUSC1Q2TAM9 212 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 ANXA8L1Q5VT79 327 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 WBP2NLQ6ICG8 309 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 SHQ1Q6PI26 577 aaKnown RBP11.32□□□□□ -0.6
USF1-206ENST00000491629 NHLRC1Q6VVB1 395 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 MFSD8Q8NHS3 518 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 PNPT1Q8TCS8 783 aaKnown RBP11.32□□□□□ -0.6
USF1-206ENST00000491629 TCP10LQ8TDR4 215 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 KTI12Q96EK9 354 aaPredicted RBP11.32□□□□□ -0.6
USF1-206ENST00000491629 OR2M2Q96R28 347 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 ZNF747Q9BV97 191 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 C20orf27Q9GZN8 174 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 MOV10Q9HCE1 1003 aaKnown RBP11.32□□□□□ -0.6
USF1-206ENST00000491629 RCE1Q9Y256 329 aa11.32□□□□□ -0.6
USF1-206ENST00000491629 TRAV20A0A0B4J274 112 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 CCDC154A6NI56 674 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 ZNF99A8MXY4 864 aaPredicted RBP11.31□□□□□ -0.6
USF1-206ENST00000491629 PPIHO43447 177 aaKnown RBP11.31□□□□□ -0.6
USF1-206ENST00000491629 PLPP2O43688 288 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 TRAF3IP2O43734 574 aaPredicted RBP11.31□□□□□ -0.6
USF1-206ENST00000491629 SLC43A1O75387 559 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 HPRP00739 348 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 FSHBP01225 129 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 NAT2P11245 290 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 GLRXP35754 106 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 SERPINB5P36952 375 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 RPS5P46782 204 aaKnown RBP11.31□□□□□ -0.6
USF1-206ENST00000491629 AQP5P55064 265 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 DEFA6Q01524 100 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 C1QL2Q7Z5L3 287 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 SERPINA11Q86U17 422 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 ZNF440Q8IYI8 595 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 IL17RDQ8NFM7 739 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 STK35Q8TDR2 534 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 UBLCP1Q8WVY7 318 aaPredicted RBP11.31□□□□□ -0.6
USF1-206ENST00000491629 SLC25A36Q96CQ1 311 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 OXGR1Q96P68 337 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 C1QTNF5Q9BXJ0 243 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 MS4A5Q9H3V2 200 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 OPN4Q9UHM6 478 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 BTNL2Q9UIR0 455 aa11.31□□□□□ -0.6
USF1-206ENST00000491629 MS4A18H0YCH9 400 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 BPGMP07738 259 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 ARAFP10398 606 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 NR2F1P10589 423 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 HLA-DOBP13765 273 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 UQCRBP14927 111 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 ZNF43P17038 809 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 ETV4P43268 484 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 MAGEB1P43366 347 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 CAPZA2P47755 286 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 LIMS1P48059 325 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 UBA52P62987 128 aaKnown RBP11.3□□□□□ -0.6
USF1-206ENST00000491629 HOXC5Q00444 222 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 MYBPC1Q00872 1141 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 PIGFQ07326 219 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 233.1 ms