RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 DNM1P46Q6ZS02 220 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 STK35Q8TDR2 534 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 TNFRSF13CQ96RJ3 184 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 PRSS16Q9NQE7 514 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 C2orf42Q9NWW7 574 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 CLEC1BQ9P126 229 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 USP36Q9P275 1121 aaKnown RBP17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 DENND4AQ7Z401 1863 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 TBC1D3KA0A087X1G2 549 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 TBC1D3BA6NDS4 549 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 TBC1D3FA6NER0 549 aaPredicted RBP17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 CTNSO60931 367 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 AGR2O95994 175 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 TMIGD3P0DMS9 266 aaPredicted RBP17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 LAMP2P13473 410 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 SCRN3Q0VDG4 424 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 DUSP5Q16690 384 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 TBC1D3GQ6DHY5 549 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 SDR9C7Q8NEX9 313 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 FGF14Q92915 247 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 SDF2Q99470 211 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 FKRPQ9H9S5 495 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 MOKQ9UQ07 419 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 ZNF281Q9Y2X9 895 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 TP53BP1Q12888 1972 aaPredicted RBP17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 RBBP9O75884 186 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 GLSO94925 669 aaPredicted RBP17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 CNR1P21554 472 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 PARM1Q6UWI2 310 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 OR2L5Q8NG80 312 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 OR4D10Q8NGI6 311 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 OR6N1Q8NGY5 312 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 ARSGQ96EG1 525 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 LMAN2LQ9H0V9 348 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 COA4Q9NYJ1 87 aa17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 WSB2Q9NYS7 404 aaPredicted RBP17.71■□□□□ 0.43
SNAPC3-206ENST00000490969 H7C417 338 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 ATG12O94817 140 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 EGFP01133 1207 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 ITPKBP27987 946 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 STARP49675 285 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 DPTQ07507 201 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 OR2L13Q8N349 312 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 OR2A1Q8NGT9 310 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 OR4K13Q8NH42 304 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 RGP1Q92546 391 aaPredicted RBP17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 COL26A1Q96A83 441 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 XKR8Q9H6D3 395 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 ESRP2Q9H6T0 727 aaKnown RBP17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 MTFP1Q9UDX5 166 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 ETV7Q9Y603 341 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 TRAV14DV4A0A0A6YYC5 116 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 IDSB3KWA1 339 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 F8W036 122 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 SLC6A6P31641 620 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 GPR85P60893 370 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 GGTLC2Q14390 218 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 ASB13Q8WXK3 278 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 SLC25A28Q96A46 364 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 SLC27A6Q9Y2P4 619 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 TRIOBPQ9H2D6 2365 aa17.7■□□□□ 0.42
SNAPC3-206ENST00000490969 RASGRP1O95267 797 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 RAB30Q15771 203 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 METRNLQ641Q3 311 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 KRT77Q7Z794 578 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 ZNF546Q86UE3 836 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 DND1Q8IYX4 353 aaKnown RBP17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 TMEM185AQ8NFB2 350 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 SLC39A1Q9NY26 324 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 GDE1Q9NZC3 331 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 ZFPL1O95159 310 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 GP1BAP07359 652 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 HIST1H1CP16403 213 aaKnown RBP17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 NANOS3P60323 173 aaKnown RBP17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 C4orf46Q504U0 113 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 TMEM88Q6PEY1 159 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 STAC2Q6ZMT1 411 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 OR14A16Q8NHC5 309 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 GRHL3Q8TE85 626 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 DEC1Q9P2X7 70 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 SERTAD3Q9UJW9 196 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 DOCK9Q9BZ29 2069 aa17.69■□□□□ 0.42
SNAPC3-206ENST00000490969 DISC1C4P0D8 188 aa17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 GPR31O00270 319 aa17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 DBIP07108 87 aaKnown RBP17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 CSF1P09603 554 aa17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 NID1P14543 1247 aa17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 RAB13P51153 203 aa17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 RAB11FIP2Q7L804 512 aa17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 NRROSQ86YC3 692 aa17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 RPS4Y2Q8TD47 263 aa17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 TSNAXQ99598 290 aaKnown RBP17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 SLC19A3Q9BZV2 496 aa17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 TSPAN10Q9H1Z9 355 aaPredicted RBP17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 ZNF768Q9H5H4 540 aaKnown RBP17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 APMAPQ9HDC9 416 aa17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 NPIPA5A0A0B4J1W7 369 aa17.68■□□□□ 0.42
SNAPC3-206ENST00000490969 A0A0D9SG52 128 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms